Rhodococcus sp. B7740: NY08_2576
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Entry
NY08_2576 CDS
T03776
Name
(GenBank) DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NY08_2576
09124 Replication and repair
03420 Nucleotide excision repair
NY08_2576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhb03021
]
NY08_2576
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_2576
Enzymes [BR:
rhb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NY08_2576
Transcription machinery [BR:
rhb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NY08_2576
DNA repair and recombination proteins [BR:
rhb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NY08_2576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
AJW40595
LinkDB
All DBs
Position
2663508..2665163
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AA seq
551 aa
AA seq
DB search
MTDGPLIVQSDKTLLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALVNFSRYAVPQPLLVDIVDTMARYGRLQLVKSPIHGLVLISLDRAVLTEVM
RHKKIAPMLGAMVDEDTVIVHPSERGHVKQMLLKIGWPAEDLAGYVDGEAHPIELDTEGG
NWTLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMARAKATTLILVTNTVAGRQWK
RELIARTSLTEDEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYD
EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI
APAECIEVRVTLTDAERMSYAVAEPEERYKLCSTAHTKIAVVKSILAKHQDAPTLVIGAY
LDQLNELGEALNAPVIQGSTKNKEREVLFDAFRKGEIQTLVVSKVANFSIDLPEASVAVQ
VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRI
TDADDLLGPAI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacggcccgctgatcgtccagtccgacaaaacgctgttgctcgaggtcgatcac
gaactcgcgggcgcagcgcgggcggccatcgcaccgttcgcggagctcgaacgtgccccc
gagcacgtgcacacctatcgcatcaccccgctggccctgtggaacgcccgtgccgcgggc
cacgacgccgagcaggtggtcgacgcgctggtgaacttctcgcgttacgcggtgccgcaa
ccgctgctggtcgacatcgtcgacaccatggcgcgctacggccggttgcagttggtcaag
agcccgatacacggtctggtcctgatcagtctggaccgcgccgtgctcacagaggtgatg
cggcacaagaagattgcacccatgctcggcgcgatggtcgacgaggacacggtgatcgtg
catccgtccgaacgcggccacgtcaagcagatgctgctcaagatcggctggcctgccgag
gacctcgccggctacgtcgacggcgaagctcaccccatcgagctcgacaccgagggcggc
aactggacgttgcgcgactaccaggagatggcggccgattcgttctgggccggtggctcg
ggagtggtggtactgccctgtggtgccggcaagacgatggtcggcgcagccgcgatggcc
cgagcgaaggcgaccacgctgattctggtcaccaacaccgtcgccggtcggcagtggaag
cgcgaactcatcgcacgcacctcgctcaccgaggacgagatcggcgagtattcgggagag
cgcaaggaaattcgccctgtgacaatcgccacgtatcaggtgatcacgcgtcgcaccaag
ggtgagtacaagcacctggagctcttcgattcccgcgactggggattggtgatctacgac
gaggtgcacctgctccccgcgccggtgttccgcatgaccgccgatctgcagtcccgtcga
cgcctcggcctcaccgcgaccctcgtccgcgaggacggccgcgagggcgacgtcttctcg
ctgatcggacccaagcggtacgacgctccgtggaaggacatcgaggcacagggctggatc
gcgcctgccgagtgcatcgaggttcgcgtcaccctcaccgatgccgagcgcatgtcctat
gccgtcgccgagcccgaggagcgctacaagctgtgctcgacggcgcacaccaagatcgcc
gtcgtgaagtcgatcctcgccaaacatcaggacgctccgacgttggtcatcggcgcgtat
ctcgatcagttgaacgagctcggtgaagcgctgaacgctccggtcattcagggctcgacc
aagaacaaggagcgtgaggtgctgttcgacgcgttccgcaagggcgagatccagacgctc
gtggtgagcaaggtggcgaacttctcgatcgaccttccggaagcctctgtggcagttcag
gtttcgggaacgttcggctccaggcaagaagaggcgcagcgcctcggccgattgctccgg
ccgaagcatgacggcggtcaggcgcatttctactcggtggtctcccgcgacaccctcgac
gccgagtacgcagcccaccgtcagcgtttcctcgccgaacagggctacgcctaccgcatc
accgacgcggacgatctgctcggtccggcgatctga
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