Rhodococcus sp. B7740: NY08_3813
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Entry
NY08_3813 CDS
T03776
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhb
Rhodococcus sp. B7740
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_3813
Enzymes [BR:
rhb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NY08_3813
DNA repair and recombination proteins [BR:
rhb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NY08_3813
Prokaryotic type
NY08_3813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AJW41820
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All DBs
Position
complement(3914987..3916207)
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AA seq
406 aa
AA seq
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MPTIPAPPSIADGSTTEDVVGWVGEHLGDLTREGPDAITAGGIRGGQSAADTALAGLDIT
GYARDRSTVLPVNRRGASRMSPYIRHGLLTLREVWDAVADAPPRDRSRYRDELMWQEYAR
HLYARTGSDLGRSLRREQPRPQGWTAQPWPEEMNCMSSVVGELHQDGWLVNQTRMWLASQ
WAVRAGATWRDGEDEMFAHLLDGSRAANRLGWQWTVGTGSGKVYGFSRWQVNKRAPSLCR
NCALKDACPIENWPDDELGPAVDGPDLNKAPIPAGPAHAEGTGAEQVWITAESLGTADPA
LAADTDRPAVFVFDEPLLRKLRLSGKRLVFLAETLGEIASTRPLEVRRGKVSDELSGRSL
ATTWAPVPGFSRIADAIAPVELHPWPWLFRPTTSSVRSFSAWRRSH
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgattccagctcccccgtcgattgccgacggctccaccaccgaggacgtcgtc
ggctgggtcggcgagcatctgggggatctgactcgcgagggtccggatgccatcacggcc
ggcggcattcgcggcgggcagtccgctgccgataccgcgctggccggactcgacatcacc
ggatatgcgcgcgatcgcagcaccgttctaccggtgaatcgccgaggcgcaagccgcatg
tcgccgtacatccgacacgggctgctgacgctgcgggaggtatgggacgcggtcgccgac
gctcccccacgcgaccgttcccgctatcgcgacgaactgatgtggcaggaatacgcgcgt
catctctacgcgcgcaccggatccgatctcggtcgttcgctacgccgtgagcagccgcga
ccccagggctggaccgcgcagccgtggcccgaagagatgaactgcatgtcctcggtggtg
ggtgaattgcaccaggacggctggctggtcaaccaaacccgcatgtggctcgcctcccag
tgggcagtccgtgccggggcgacgtggcgcgacggcgaagacgagatgttcgcccatcta
ctcgacggctcccgcgcagccaaccgcctcggctggcagtggaccgtcggtaccggaagc
ggcaaggtctacggcttcagccggtggcaggtgaacaagcgagcaccatccctgtgccgc
aactgcgcattgaaagatgcgtgccccatagagaattggcccgacgacgagctcggcccg
gcggtcgacggtcccgatctgaacaaggccccgattcccgccggccccgcccatgcggaa
ggcactggcgcagaacaggtgtggataacggcagagtcactcggcaccgcagacccggca
ctggccgccgacaccgatcgacccgcggtgttcgtcttcgacgagccactcctgcggaaa
ctcaggctctccggcaagaggctggtctttctcgccgagacgctcggcgagatcgcgtcg
acccgcccgttggaggtacgtcgcggcaaagtgtccgacgagctctccggacgctccttg
gctaccacctgggcccccgttcccggcttctcccgcatcgccgacgccatagccccggtc
gagttgcatccgtggccgtggctgttccgaccgaccacatcctcggtacggtcgttcagc
gcgtggcgacgcagtcattga
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