Rhodococcus sp. B7740: NY08_3918
Help
Entry
NY08_3918 CDS
T03776
Name
(GenBank) polyketide synthase
KO
K12437
polyketide synthase 13
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb00074
Mycolic acid biosynthesis
rhb01100
Metabolic pathways
rhb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
NY08_3918
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhb01004
]
NY08_3918
Lipid biosynthesis proteins [BR:
rhb01004
]
Polyketide synthase
Modular PKS
NY08_3918
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
IncF
Motif
Other DBs
NCBI-ProteinID:
AJW41925
LinkDB
All DBs
Position
4010565..4015622
Genome browser
AA seq
1685 aa
AA seq
DB search
MDGGDLTVAQLRDWLRNWVADATGQPASAISDDRPMEEFGLSSRDAVALSGEIEELVGVT
LTATVVYQHPTIASLAKIIIEGEPDEPVGTVDDAFYTSGGNSGDAHDVAIVGLSSRFPGT
GQTPEEMWSLLIEGRDGITDLPDGRWQEFTSDPVIAAAVAATVTKGGYLDDVKTFDAEFF
AMSPNEVVNVDPQQRLALELTWEALEHAHIPASSIKGRQVGVFIGSSSNDYQLIAVSDPA
VHPYALTGTSTAIVANRVSYFYDFRGPSIAVDTACSSSLVAVHQAVRSLRTGESDLAVAG
GVNMLLAPPITVGFGQTGVLAPDGRIKAFSSDANGMIRSEGGGLVVLKRLEDAERDGDDI
LAVIAGSAINQDGRSNGLLAPNPDAQADALRFAYRDAGINPSGVDYIEAHGTGTILGDPI
EADALGRVVGRGRDADKPALLGSAKTNFGHLESAAGAAGLIKVVLAMQENKLPASLNYAG
PNPYIDFDKAHLKVIPEATDWPRYTGKAVAGVSGFGFGGTNAHVVVREYVPGETDGAFDP
AAVDPEAVLVEGLTDVSGAELPIVADPEPEPAVSEVETTDPVAEAETILSDAETGSETVI
LAVSAALPSRRKRAAGELADWLETEEGSTTPLVDVGRTLARRNHGRSRAVVLASTTAEAI
AGLRAIAAGKPGPGVFSADSPASNGAVWVFSGFGSQHRKMASRLYRTNAVFAAEVDKVDE
LLVDEAGYSIREIILDDSQTYEFENSQVGIFVIQIALAATLRAHGAEPSAVIGHSMGEVA
AAYVAGGLNLEDAVRIIYARSRLLAEGQDGLGAASQGAMALVEYTPDEVKTLTDQFPNVE
PCVYAAPTHTTVGGPRAEVEALVEMAEAAGKMARLLDVKGAGHTAAVDVLLGELAAELAG
IEPGKLTAGVYSSVDREAHYRVGHAPIHGVEYWTKGMRHPVWFTQAVNVAVGDGHTTFVE
LAPNPVALMSVAATAWAAGVADSTLIPTLKRKEDESETFLAALAQLYVHGHALELATLFE
SGPYADIPRTAYLRKEFWLNSQVSSSGNARVPGARVALPDGRHVWEVQASAVADFDALVT
AAASQVFSDVALGVSVSHAGVPKAGTVVTTLTSHLGGASVQVHAHEGSAFTLLHEAVVTS
GDVRPEPVVAVEERSSSPMEELPEVVETFGDRWDPNGNQKLEDRLAVIVAESMGYAPEDL
PPEVPLIELGLDSLSAVRIKNRVEYEFDIPTVQLQAVRDANLREVEKYLRYAIENRDEVQ
ALADKQAAEKAAEQAAASPAAVEPAPAAEAAAPVAEGTTPVEKAAPAVAAAAQTDLGGKE
AFAEAAGSDVPPRDNAERMTFATWAVVTKESAKGIFNTLPILDDETAEKLAARLTERAGG
EITFDDVLDSETIEQLADKVRPHLEDGEIDGVVRNLRARPEGSTATPVFAFHSAGSSTVA
YEPLLRKLPAGTPMYGLERVEGPIAVRAAEYVPLIRAIQPEGPYVFVGWSLGGILAYEVA
RQMEEEGIEVAYVGLLDTVMPGTQIPDTKDEVRKRWERYAAFAKKTYNVDYPIPYDKLVD
SDDEGQIRIITDLVKLSGAKIPGGIIEHQRTSWLDNRAIQTAELKKYGGHVTLYMADKYH
DDAIALEPAYATREEHGGWGPVVEDLEIVYVGGDHLAVVDEPYIGKIAAHLSKTLENIES
ARTGA
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
gtggacggcggagacctcacggttgcgcagctgcgggactggctgcgcaactgggttgca
gacgcgaccgggcaaccggcgtcggccatctccgacgaccgcccgatggaggaattcggt
ctgtcctctcgcgatgccgtcgcattgagcggcgagatcgaggagctggtgggagtcacg
ctgaccgccaccgtcgtctaccagcaccccaccatcgcctcgctggccaagatcatcatc
gagggcgagccggacgagcctgtcggcaccgtcgacgacgcgttctacaccagcggcggg
aactccggcgacgcgcacgacgtcgcgatcgtcggcctgtcgtcccgtttccctggcacc
ggacagactccggaggagatgtggtcgctgctgatcgagggccgcgacggcatcaccgat
ctgcccgacggccgctggcaggaattcacgtccgatccggtcatcgccgccgcggtggcc
gcaacggtgaccaagggtggttacctcgacgacgtcaagaccttcgatgccgaattcttc
gcgatgtcgcccaacgaggtcgtcaacgtcgacccgcagcagcggctcgcactcgagctg
acctgggaagcgttggagcacgcgcacattccggccagctcgatcaagggccgccaggtc
ggcgtcttcatcggcagctcctccaacgactaccagctcatcgccgtcagcgacccggcc
gtgcacccgtatgccctcaccggtacgtccaccgccatcgtcgccaaccgagtgtcctac
ttctacgacttccgcgggccgtcgatcgccgtcgacaccgcgtgctcgtcttcgctggtc
gccgtgcaccaggcggtgcgcagtttgcgtaccggcgaatccgatcttgcggttgccggt
ggcgtcaacatgcttctcgcgccgcccatcaccgtcggcttcggccagacgggtgtgctc
gcgcccgacggccgaatcaaggccttctcctccgacgcgaacggcatgatccgctccgaa
ggcggcggactcgtcgtgctcaagcgactcgaggacgccgaacgcgacggagacgacatc
ctcgccgtcatcgccggatccgcgatcaaccaggacggccgctccaacggtctgcttgcg
ccgaacccggacgcacaggccgatgcgctgcggttcgcataccgcgacgccggcatcaac
ccgtcgggcgtcgactacatcgaagcgcacggcaccggaaccattctgggcgacccgatc
gaggcggacgctctcggtcgggtggtcggtcgcggccgtgacgcagacaagccggccctg
ctcggatcggccaagaccaacttcggacacctcgaatctgccgcaggcgcagcaggtttg
atcaaggtcgtcctcgcgatgcaggagaacaagctccctgcgtcgctgaactacgcgggc
cccaacccgtacatcgacttcgacaaggcacacctgaaggttattccggaggccaccgac
tggccgcggtacaccggcaaggccgtcgcgggtgtgtccggtttcggcttcggtggcacc
aacgcacacgtcgtcgtgcgcgagtacgtcccgggtgagaccgacggcgcattcgacccc
gcggccgtggacccggaagccgttctcgtcgaaggcctcaccgacgtctccggtgccgag
ctgccgatcgtcgccgaccccgagcctgaacctgccgtctcggaggtcgagacaaccgat
ccggtagccgaggccgagacgattctgtccgatgctgaaactggttcggagacagtcatt
ctcgcggtgtccgcggcccttccgtcgcgccgtaagcgagccgccggagagttggccgac
tggctcgaaacagaagagggcagcacgacgcctctcgtcgacgtcggccgcacgttggcc
cgccgcaaccacgggcgttcgcgcgcagtggttctggcatccaccaccgccgaggccatc
gcaggattgcgcgccatcgccgcaggaaagcccggacccggagtgttctccgcagactca
ccggcctccaacggcgcagtgtgggtgttctccggcttcggctcacagcaccgcaagatg
gcatcgcgcctctaccgcaccaacgccgtgttcgccgccgaggtcgacaaggtggacgaa
ctgctggtcgacgaggccggctactccatccgcgagatcatcctcgacgactcgcagacc
tacgagttcgagaactcccaggtgggcatcttcgtcatccagatcgccttggccgcaacg
cttcgcgcgcacggtgccgagccgtcggccgtcatcggacactcgatgggtgaggtggcg
gctgcatacgtcgccggcggcctgaacctcgaagacgcagtgcgcatcatctacgcccgg
tcgcgactgctggccgagggccaggacggactcggagccgcatcgcagggcgcaatggct
cttgtcgagtacaccccggacgaggtcaagaccctcaccgatcagttccccaacgtcgag
ccctgcgtctacgcagcaccgacccacaccaccgtcggcggaccgcgcgccgaggtagag
gctctcgtcgagatggccgaggccgcaggcaagatggcccgactcctcgacgtcaagggt
gccggacacaccgcagccgtcgacgtgctgctcggtgagctggccgccgaactcgccgga
atcgaacccggcaagctcacggccggggtctactcgtcggtcgatcgcgaggcccactat
cgcgtcgggcatgcgccgatccacggcgtcgagtactggaccaagggaatgcgtcatccg
gtctggttcactcaggccgtcaatgtcgcggtaggagacgggcatacgacgttcgtcgag
ctcgctcccaatcccgtcgcattgatgtcggttgccgccacggcatgggctgcaggcgtc
gccgattcgactctgattccgacgctcaagcgcaaggaggacgagtccgagaccttcctc
gccgctctggcgcagctgtacgttcacggtcatgcactggaactggcaacgctgttcgag
tccggcccgtacgcggacatcccgcgaactgcctacctgcgcaaggagttctggctgaac
tcgcaggtcagctccagcggtaacgcgcgagttcccggtgcccgcgtcgcactgccggac
ggccgccacgtctgggaggtccaggcctccgccgtcgccgatttcgatgcactggtcact
gctgccgcgtcgcaggtgttctccgatgtggcactgggcgtttcggtctcccacgccggc
gtgccgaaggcgggtacggtcgtcaccacgttgacctcgcacctcggtggcgcgtcggta
caggtgcacgcacacgagggctcggcgttcaccctgctgcacgaggccgtcgtcacctcg
ggtgacgtgcgaccggaacccgttgtcgctgtggaagagcgctcctcgtctcccatggag
gagctgccggaggtcgtcgagacgttcggtgatcgctgggatccgaacggcaaccagaag
ctcgaggaccgactggccgtcatcgtcgcggagtccatgggctacgcgcccgaggatctg
ccgcccgaggttccgctgatcgaactgggtctggattcactcagcgccgtgcgcatcaag
aaccgcgtcgagtacgaattcgatatccccacagtgcaattgcaggccgtgcgcgacgcc
aacctgcgtgaggtggagaagtacctgcgctacgcgatcgagaaccgcgacgaggtgcag
gcactggcagacaagcaggcggcggagaaggcggccgaacaggctgctgcgtcgcctgcc
gccgtcgagcctgcccccgctgccgaggccgctgctcccgttgccgagggcacgactccc
gtcgagaaggctgccccggcagttgctgccgcggcgcagaccgatctcggcggcaaggaa
gcattcgccgaggccgccggatccgacgtgcctccgcgcgacaatgccgagcggatgacg
ttcgcgacatgggctgtggtgacgaaggaatcggccaagggaattttcaacaccctgccg
atcctcgacgacgagacggcggagaagctggccgctcgtctgaccgagcgggccggcggc
gagatcaccttcgacgacgtcctggactccgagaccatcgaacagctcgcagacaaggtt
cgtccgcacctcgaggacggtgagatcgacggcgtcgtacgcaatctgcgtgcccggccc
gaaggctccaccgccacaccggtgttcgcgttccactcggccggtagctccaccgtcgcc
tacgagccgctgctgcggaagctgcctgccggcacgccgatgtacggcctcgagcgcgtc
gaaggccccatcgccgtgcgagctgcggagtacgtgccgctgatcagggcgatccagccc
gaaggaccgtacgtgttcgtcggctggtcgctcggcggcatcctcgcctacgaggtcgcg
cgtcagatggaggaagagggcatcgaggtcgcctacgtggggctgctcgacaccgtcatg
cccggcacgcagatcccggacaccaaggacgaggtgcgcaagcgctgggaacgctacgcg
gcgttcgcgaagaagacgtacaacgtcgactacccgattccctacgacaagctggtcgac
tccgacgacgagggacagatccgcatcatcaccgatctggtcaagctcagcggtgccaag
atccccggcggcatcatcgagcatcagcgcacgtcgtggctcgacaatcgggccatccag
acggccgagctcaagaagtacggcgggcacgtgacgctgtacatggccgacaagtaccac
gacgacgcgatcgccctcgagcccgcgtacgccacccgcgaagagcacggtggctgggga
ccggtggtcgaggacctggagatcgtctacgtcggaggcgatcacctcgcggtcgtcgac
gagccgtacattggaaaaattgcggcccatttgtcgaagacgctcgagaacatcgagtct
gcaagaaccggagcgtag
DBGET
integrated database retrieval system