Rhodococcus sp. B7740: NY08_4041
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Entry
NY08_4041 CDS
T03776
Name
(GenBank) Glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb00500
Starch and sucrose metabolism
rhb01100
Metabolic pathways
rhb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NY08_4041
Enzymes [BR:
rhb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
NY08_4041
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
GlgX_C
Cellulase
DUF3459
PglL_A
FlgD_ig
DUF5696
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
AJW42046
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All DBs
Position
complement(4146930..4148942)
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AA seq
670 aa
AA seq
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MGVSRLSNDGANLAVYSETADSVSVVVLNDDGTERSTTLLTQRTGHVFHDLIPDVTPGAR
YGLRVDGPWDPASGLRHNSAKLLLDPYATAITGQVDWNESVFSHLHEEPETRNDEDSAPY
MPYSVAVQSSFDWSGDESPRTPLDKTVVYEVHVKGFTATNPDVPEDLRGTYAGLAHPAAI
AHLKRIGVTAVELLPIHQFVQDSHLLEEGRRNYWGYNSIGFFAPHNEYSSTGDTGGQVDE
FKALVKAMHDNGIEVILDVVYNHTAEGNHLGPTLSLKGIDNGSHYRLVDDDRSAYYDTTG
TGNSLNVGHPAALALILDSLRYWVTEMHVDGFRFDLASTLTRQDSDLDVHSAFLSLVHQD
PTLAPVKLIAEPWDTQGYQVGGFPARWSEWNGKFRDDVRDFWRGESGALPALAQRVTGSP
DVYESTRRPTLASVNFITAHDGFTLADLNSYDDKHNEENGEDSQDGESDNRSWGCGAEGP
TDDEGVNALRARQQRNHLATLLLSAGVPMILGGDELGRTQNGNNNAYCQDNEVSWFDWST
ADQDLIDFTTHLIALRTEHPALRPTWFRHDSDSDEEGAGPDTVDFYRADGEKLSDEDWSD
GNAHSILVLMRAGESDASFAWMVNASPGAVEFTLPKGTWTQSTSSDPDQAYEAGGPSILI
REHSFTLLQG
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgtctcacgtctgtcgaacgacggtgccaaccttgccgtctactccgaaacagcg
gactcggtctctgtggtcgtattgaacgacgacggaacagagcgcagtacaacgcttttg
acgcagcgcaccggtcacgtctttcacgatctgattcccgacgtcaccccgggagcgcgg
tacggtctgcgcgtcgacggtccgtgggaccccgcgtcggggctgcggcacaactcggcg
aagttgctcctcgacccgtacgccaccgccatcaccggtcaggtcgactggaacgagtcg
gtcttctcgcatctgcacgaggaaccagagacccgcaacgacgaggattcggcaccgtac
atgccgtattccgttgctgttcaatcgagcttcgattggtcgggagacgagtcaccgcgc
acaccgttggacaagacggtcgtctacgaggtgcacgtcaagggattcaccgccaccaat
cccgatgtgcccgaggatcttcgcggcacctacgccggactggcacaccccgcagccatc
gcacatctgaagcgaatcggcgtcacggcagtggaactgctgccgatccaccagttcgtt
caggattcgcatctgctggaggagggccgtcgcaattactggggctacaactccatcggc
ttcttcgccccgcacaacgagtacagcagcaccggcgacaccggcggccaggtggacgag
ttcaaggccttggtcaaagccatgcacgacaacggcatcgaggtcattctcgacgtcgtc
tacaaccacaccgccgagggcaaccatctcggaccgaccctctcgctcaagggaatcgac
aacggctcgcactaccgactcgtcgacgacgaccggagcgcgtactacgacaccaccggt
accggcaacagcctcaacgtcggtcaccccgccgccctggcactcatcctcgactcactg
cgctactgggtgaccgagatgcacgtcgacggcttccgcttcgacctggccagcaccctg
actcgtcaggactcggacctcgacgtgcacagtgcgttcctcagcctcgtgcatcaggat
ccgacgctcgcgccggtcaagctcatcgccgaaccgtgggacacccagggctaccaggtg
ggcggcttcccggcgcgttggtcggagtggaacggcaagttccgcgacgacgttcgcgat
ttctggcgcggcgagagcggcgcgctgcctgcactggcgcaacgtgtcaccggcagcccg
gacgtctacgagagcacccgtcgtcccacgttggcgagcgtcaacttcatcaccgcacac
gacggcttcacgttggccgacctgaactcctacgacgacaaacacaacgaggagaacggc
gaggacagccaggacggcgaatccgacaaccgctcgtggggttgcggtgccgagggcccg
accgacgacgagggtgtcaacgcattgcgagctcgccagcaacgcaatcaccttgcgacg
ctgctgctctcggccggtgtgccgatgatcctcggcggcgacgagctcggccggacgcag
aacggcaacaacaatgcctactgccaggacaacgaggtctcctggttcgactggagcaca
gccgatcaggacctcatcgacttcaccacgcacctcatcgcgcttcgcaccgagcacccg
gcactgcgccccacctggttccggcacgacagcgattccgacgaggagggagccggcccg
gacaccgtcgacttctatcgcgccgacggcgagaagctgtccgacgaggattggtccgac
ggcaacgcccacagcattctggtcctcatgcgcgccggtgaaagtgatgcctcgttcgcg
tggatggtcaacgcctcacccggagccgtggaattcactctgccgaagggcacgtggact
cagtcgacctcgagcgaccccgatcaggcgtacgaggccggtggcccgtccatcctgatc
cgcgagcattcgttcacgttgctgcagggctga
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