Rhodococcus sp. B7740: NY08_4084
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Entry
NY08_4084 CDS
T03776
Name
(GenBank) Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb00010
Glycolysis / Gluconeogenesis
rhb00020
Citrate cycle (TCA cycle)
rhb00260
Glycine, serine and threonine metabolism
rhb00280
Valine, leucine and isoleucine degradation
rhb00310
Lysine degradation
rhb00380
Tryptophan metabolism
rhb00620
Pyruvate metabolism
rhb00630
Glyoxylate and dicarboxylate metabolism
rhb00640
Propanoate metabolism
rhb00670
One carbon pool by folate
rhb00785
Lipoic acid metabolism
rhb01100
Metabolic pathways
rhb01110
Biosynthesis of secondary metabolites
rhb01120
Microbial metabolism in diverse environments
rhb01200
Carbon metabolism
rhb01210
2-Oxocarboxylic acid metabolism
rhb01240
Biosynthesis of cofactors
Module
rhb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NY08_4084
00020 Citrate cycle (TCA cycle)
NY08_4084
00620 Pyruvate metabolism
NY08_4084
00630 Glyoxylate and dicarboxylate metabolism
NY08_4084
00640 Propanoate metabolism
NY08_4084
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NY08_4084
00280 Valine, leucine and isoleucine degradation
NY08_4084
00310 Lysine degradation
NY08_4084
00380 Tryptophan metabolism
NY08_4084
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NY08_4084
00670 One carbon pool by folate
NY08_4084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhb04147
]
NY08_4084
Enzymes [BR:
rhb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NY08_4084
Exosome [BR:
rhb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NY08_4084
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
Pyr_redox_3
DAO
HI0933_like
AlaDh_PNT_C
Amino_oxidase
FAD_binding_2
FAD_oxidored
Lycopene_cycl
3HCDH_N
Thi4
2-Hacid_dh_C
NAD_binding_8
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AJW42089
LinkDB
All DBs
Position
complement(4196308..4197675)
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AA seq
455 aa
AA seq
DB search
MSDVDVLILGGGSGGYSCALRAEQLGLTVALVEEDKLGGTCLHRGCIPTKALLHTAEVAD
AVRGSAHVGVTASFTGVDMPAALGYQRSVVAGLYAGLQGLLKRPGIEIVSGSGQVVGPRT
VEVEGRRITGASLVLATGSYSRTIPGIELGPRVLTSDGAMALDRVPESVVVLGGGVIGIE
FASIWASFGAKVTVVEALDRIVPGEDEWSSKQSTKALRKRGNDIRTGTKVESVTESPDAV
SVSLSSGDTLDADLVLVSVGRGPRTDGLGLAEQGIATERGFVTVDDSLLTTVDGVYAVGD
IVAGYQLAHRGFQHGMFVAEHIAGLAPARIDGDLIPRVTYSHPEVASVGLTEKAAEQKYG
TVTSVVYDLGGNGKSRVLSTAGGVKVIRARDDGPVVGVHLVGDRVGELIGEAQLAVAWEA
LPAEVGSFVHAHPTQNEALGEAMMALSGRPLHAHS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtggacgttctcattcttggtggagggtcgggcggctattcgtgcgccctg
cgtgccgaacaactcggcctgacggtcgcgctcgtcgaggaagacaagctcggtggcacc
tgtctgcatcgcggatgcatccccaccaaggccctgttgcacaccgccgaggttgccgac
gcggtgcgcggctcggcgcatgtcggcgtcaccgcatcgttcactggtgtggacatgccc
gcggcactgggctatcagcgcagcgtggtcgccggcctgtacgcaggtctgcagggattg
ctgaagcgtccgggcatcgaaatcgtgtccggtagtggccaggtggtcggtcctcgcacc
gtcgaggtggagggtcgacgcatcaccggggcctcgctggttctcgccaccgggtcgtat
tcacgcaccatccccggtatcgaactgggacctcgcgtgctcaccagcgacggggcgatg
gcactcgatcgggttccggagtcggtcgtcgtgctcggcggcggtgtgatcggtatcgag
ttcgccagtatctgggcatcgttcggtgcgaaggtcaccgttgtcgaggcgctcgatcgc
atcgtgccgggcgaagacgaatggtcctcgaagcagtcgaccaaggcattacgcaagcgc
ggcaacgacattcgtaccgggaccaaggtcgagtccgtcaccgaatctcccgacgcagtc
tctgtgtcattgtcgtccggggacaccctcgacgccgatctcgtactggtgtccgtcgga
cgcggacctcgcaccgacggcctgggtctggccgaacagggcatcgccaccgaacgcggc
ttcgtcactgtcgacgacagtctgctcaccaccgtggacggcgtctatgccgtcggcgac
atcgtggcggggtatcagttggcgcaccgcggttttcagcacggcatgttcgtcgccgag
cacatcgccgggctcgcaccggcacgcatcgacggcgatctcattccgcgcgtgacctat
tcacatccggaggtcgcgtcggtgggactcaccgaaaaggccgcggagcagaagtacggc
acagtgacctccgttgtttacgacctcggcggcaacggcaagagccgcgtcctgtccacc
gccggcggagtcaaagtgattcgagcccgtgacgacggcccggttgtcggtgttcacctc
gtcggtgaccgcgtgggcgaactgatcggcgaggctcagctcgcggttgcgtgggaagca
ctgccagcggaggtcggaagtttcgtgcacgcccatcccacgcaaaacgaagcgctgggt
gaagcaatgatggcgttgtcgggacgtccgctgcacgcgcacagttga
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