Rhodococcus sp. B7740: NY08_4152
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Entry
NY08_4152 CDS
T03776
Name
(GenBank) ABC transporter, periplasmic substrate-binding protein YnjB
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NY08_4152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhb02000
]
NY08_4152
Transporters [BR:
rhb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NY08_4152
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AJW42157
LinkDB
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Position
complement(4260675..4261910)
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AA seq
411 aa
AA seq
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MIRSVRCAVTIAASAGLLLTACAAPDSEAPIAEAQSWSEIEQQAQGQTVSLWMYGGDEQG
NAYVDDVLTPAAAEEGVTLRRVPVESTTDAVTRILSERQAGVTDGEVDLVWVNGANFGTG
KQAGAWLCGWTQNLPNMELTDPEDPLLLDDFGTPVDNCESPWHKAQFTLVYNAAAIPDPP
TTFDGVLDWARANPGRFTYPAPPDFTGSVFLREALINASGGVDEVPARFDQDSYDRLTPA
LFDRLNELAPSLWREGTTYPQSSSELDALYAGGQVDMTMTYGPATLPKLVADGTFPPETR
VLTLDEGTVGNASFLAIPSTSGKSAAAQVVANLALSPEQQLAKATPDVWGQFTVLDLDQL
TPESRAQFEALPSSTVLPSYEELSANAHPELSADWVSPLDEGWRRSVLAGQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgttcggtacggtgcgcagtgacgattgccgcgagcgcagggctgctgctcacg
gcctgcgctgcgccggattcggaagctccgatcgccgaggcgcagtcgtggagcgagatc
gaacagcaggcacaggggcagaccgtctcgctgtggatgtacggcggcgacgagcagggc
aacgcctacgtcgacgatgtgctcacccccgcggcggccgaggaaggcgtcaccctgcgc
cgggtgccggtggaatcgaccaccgatgccgtcacccgcatcctgtccgagcggcaggcc
ggggtcaccgatggcgaagtcgacctggtgtgggtcaacggcgcgaacttcggcaccggc
aagcaggcgggcgcgtggctgtgcgggtggacgcagaacctgccgaacatggaactgaca
gatcccgaggatccgctgttgctcgacgacttcggcactccggtcgataactgcgaatca
ccttggcacaaggctcaattcacattggtctacaacgcggcggccatccccgatccgccg
acgacattcgacggcgtgctcgactgggctcgcgcgaacccgggccgcttcacttacccc
gctcccccggacttcaccggatcggtgtttctgcgtgaggcgttgatcaatgcctcgggc
ggcgtcgacgaggtacccgctcggttcgatcaggactcctacgaccgcttgaccccggca
ctgttcgatcgactgaacgagctcgccccgtcactctggcgcgaaggcacgacgtatcca
cagtcctcctccgagctcgacgccctctacgccggcggccaggtcgacatgaccatgacc
tacggccccgcgaccctcccgaaactcgtcgccgacggcaccttcccgccggagactcgc
gtcctgactctcgacgagggaaccgtcgggaatgcgagtttccttgccatcccatcgaca
tcggggaagtcggccgcggcacaggtggttgccaacctcgcgttgtcgcccgagcaacaa
ctcgcgaaggcgacgccggacgtgtggggtcaattcaccgttctcgacctggatcaattg
acgccggagtctcgcgcgcagttcgaggcgttgccgagttcgacggtgctgccctcctac
gaggagttgtcggccaatgcgcatcccgaactctcggcggactgggtctcgccgctcgac
gagggttggcgtcgaagcgtgctcgccggtcagtga
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