Rhodococcus sp. B7740: NY08_4303
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Entry
NY08_4303 CDS
T03776
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhb
Rhodococcus sp. B7740
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhb03032
]
NY08_4303
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_4303
Enzymes [BR:
rhb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NY08_4303
DNA replication proteins [BR:
rhb03032
]
Prokaryotic type
DNA Topoisomerases
NY08_4303
DNA repair and recombination proteins [BR:
rhb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NY08_4303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJW42305
UniProt:
A0A0D5AHB3
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All DBs
Position
4413589..4416582
Genome browser
AA seq
997 aa
AA seq
DB search
MAARNSGTGDSSAEPRRLVIVESPTKAKKIAPYLGSNYVVEASVGHIRDLPRGAADVPAK
YKGEPWARLGVDVDHDFEALYVVSPEKKGKVAELKSLLKDADELYLATDPDREGEAIAWH
LLETLNPKIPVRRMVFHEITKPAILAAAADTRDLDQDLVDAQETRRILDRLYGYEVSPVL
WKKVMPKLSAGRVQSVATRIVVQRERERMAFRSAEYWDISATLDAGAEATPRSFGARLVN
VDGNRVAAGRDFGADGKLKSDAVTVLDEPRARRLAEALEGVDLTVASAEDKPYTRKPYPP
FMTSTLQQEAARKLRFSSERTMRVAQRLYENGYITYMRTDSTTLSASAISAARTQATELY
GPEYVHPSPRQYTRKVKNAQEAHEAIRPSGDVFQTPGQLHSALQTDEFRLYELIWQRTVA
SQMADVRGTTLTLRITGTAGTGEECTFSASGRTITFAGFLKAYVESVDDQAGGQSDDAES
RLPALVQGQAVTATQLDPDGHTTNPPARFTEASLIKTLEELGIGRPSTYSSIIKTILDRG
YVYKRGSALVPSWVAFSVVALLEAHFGRLVDFDFTAGMEDDLDAIAGGRERRGNWLQSFY
FGGDTGAEGSVARSGGLKKMVGQNLEEIDARTINSIRLFDDSEGREIHVRVGRYGPYLER
MVRNDDDPDGDPISQRANLPDDLPPDELTIDFAEKLFATPQEGRKLGVDPLTGHDIVAKE
GRFGPYVTEILPEPEPEPTPPEPDIVPVPSGNDSDGGGGVKTAVKKAAAKKAPAKKAAAK
KATGPKPRTGSLLKSMDLATITLDDALKLLSLPRVVGVDPESKEEILAQNGRYGPYLKKG
TDSRSLADEDQMFTVTLEEALKIYAEPKRRGRQGEAKPPLREMGVDPISEKPMVIKDGRF
GPYVTDGETNASLRKDDDVESITDDRASELLADRRARGPVKKKAPAKKAAAKKAPAKKAA
AKKAPAKKAAAKKTATKTTAAKKAPVKKAPAKKTDSE
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgtaacagcggcacgggggacagctccgccgagccacgtcgtctggtcatc
gtcgagtctccgaccaaggcaaagaagatcgccccgtacctcgggagcaactacgtcgtc
gaggcctccgtcggccacattcgcgaccttccccgcggtgccgcggatgttcccgcgaag
tacaagggtgagccctgggcgcgtctcggcgtggacgtcgaccacgacttcgaggccctc
tacgtcgtctcgccggagaagaagggcaaggtcgccgagctcaagagcctgctcaaggac
gccgacgagctctatctcgccactgaccccgaccgcgagggtgaggccatcgcctggcat
ctcctcgagaccctgaaccccaagatccccgttcgacgcatggtgttccacgagatcacc
aagccggccatcctcgccgccgcggccgatacccgcgacctggaccaagacctggtcgac
gcccaggagacgcgtcgtatcctcgaccgtctctacggctacgaggtcagcccggtgctg
tggaagaaggtcatgccgaagctctcggcaggccgagtgcagtccgtcgccacccgcatc
gtcgtccagcgtgagcgcgagcggatggctttccgcagcgcggagtactgggacatctcc
gccacgctcgacgccggagccgaggcaacgccgcgcagtttcggtgcccgtctggtcaat
gtcgacggcaatcgcgtcgccgccggtcgcgacttcggggccgacggcaagctcaagtcc
gatgcagtgaccgtcctcgacgaaccccgtgcccgacgcctcgccgaggctctcgagggc
gtcgatctgacggtcgcgtccgccgaggacaagccctacacccgcaagccctacccgccg
ttcatgacgtcgacgctgcagcaggaagccgcccgcaagttgcgcttcagctccgagcgc
accatgcgggtcgcgcagcggctgtacgagaacggctacatcacctacatgcgtaccgac
tcgacgacgctgtcggcgtcggcgatctccgcggcacgcacacaggcgaccgagctctac
gggccggagtacgtccatccctcgccgcggcagtacacccgcaaggtcaagaacgcgcag
gaggcccacgaggccatccgcccgtccggtgacgtcttccagacgcccggtcagttgcac
tcggccctgcagaccgacgaattccgactctacgagttgatctggcagcgcacggtcgcg
tcgcagatggccgatgttcgcggcaccacgctgactttgcgcatcaccggaacggccgga
accggcgaggagtgcacgttctccgcatccggtcgcaccatcacgttcgccggcttcctc
aaggcctacgtggagagcgtcgacgatcaggcaggcggacagtccgacgacgccgaatcc
cgtttgcctgccctggttcagggccaggccgtcaccgccacccagctcgatcccgacggc
cacaccacgaacccgcccgcacgattcaccgaggcgtcgctcatcaagacgctagaggaa
ctgggcatcggtcggccgtcgacgtattcgtcgatcatcaagaccatcctcgaccgcggg
tacgtctacaagcgcggcagtgcactggtgccgtcgtgggtggcgttctcggtggttgcc
ttgctggaggcgcacttcgggcgtctggtggacttcgacttcaccgcagggatggaggac
gacctcgacgcgatcgcgggaggccgtgagcgacgcggcaattggctgcagagcttctac
ttcggcggcgacaccggtgccgagggttcggtggcccgctccggtggtctgaagaagatg
gtgggccagaatctcgaagagatcgatgcgcgcaccatcaactccattcgcctgttcgac
gactccgaggggcgcgagatccatgtgcgcgtaggccgttacggcccgtacctcgagcgc
atggtgcgcaacgacgacgatcccgacggcgatccgatcagccagcgcgccaacctgccc
gacgatcttccgccggacgaattgacgatcgacttcgccgaaaagctgttcgccacaccg
caagagggccgcaaactcggtgtcgatccgctgaccggtcacgacatcgtcgccaaggaa
ggccgtttcgggccctacgtcaccgagatcctgcccgagccggaacccgaaccgacgccc
cccgagcccgacatcgtcccggtgccgtccggcaacgacagtgacggcggcggcggggtc
aagaccgcggtgaagaaggccgcggccaagaaagcaccggccaagaaggcggctgcgaag
aaggcgaccggccccaagccgcgcaccggttctctgctcaagtccatggatctggcgacc
atcacgctcgacgatgcactcaagctgctgtcgctgccgcgtgtcgtcggagtcgatccg
gagtccaaggaagagatcctcgcgcagaacggtcgctacggcccgtatctgaagaagggc
accgactctcgctcgctcgccgacgaggatcagatgttcaccgtcacgctggaagaggcg
ctcaagatctacgccgagcccaagcgtcgcggtcgtcagggtgaagccaagccgccgcta
cgcgagatgggcgtcgacccgatcagtgagaagccgatggtgatcaaggacggtcgcttc
gggccgtacgtcaccgacggtgagacaaacgccagcctgcgcaaggacgacgacgtggag
tcgatcaccgacgatcgcgcgtcggagttgttggcggacaggcgtgctcgcgggccggtg
aagaagaaggcaccggccaagaaggcggctgccaagaaggcaccggcgaagaaggccgct
gcgaagaaagctccggccaagaaagctgctgcgaagaagacggccaccaagaccactgcc
gcgaagaaggcaccggtcaagaaggctccggccaagaagaccgacagcgaatag
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