KEGG   Rhodococcus sp. B7740: NY08_4303
Entry
NY08_4303         CDS       T03776                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rhb  Rhodococcus sp. B7740
Brite
KEGG Orthology (KO) [BR:rhb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhb03032]
    NY08_4303
   03400 DNA repair and recombination proteins [BR:rhb03400]
    NY08_4303
Enzymes [BR:rhb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     NY08_4303
DNA replication proteins [BR:rhb03032]
 Prokaryotic type
  DNA Topoisomerases
   NY08_4303
DNA repair and recombination proteins [BR:rhb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      NY08_4303
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim HC2 Toprim_4
Other DBs
NCBI-ProteinID: AJW42305
UniProt: A0A0D5AHB3
LinkDB
Position
4413589..4416582
AA seq 997 aa
MAARNSGTGDSSAEPRRLVIVESPTKAKKIAPYLGSNYVVEASVGHIRDLPRGAADVPAK
YKGEPWARLGVDVDHDFEALYVVSPEKKGKVAELKSLLKDADELYLATDPDREGEAIAWH
LLETLNPKIPVRRMVFHEITKPAILAAAADTRDLDQDLVDAQETRRILDRLYGYEVSPVL
WKKVMPKLSAGRVQSVATRIVVQRERERMAFRSAEYWDISATLDAGAEATPRSFGARLVN
VDGNRVAAGRDFGADGKLKSDAVTVLDEPRARRLAEALEGVDLTVASAEDKPYTRKPYPP
FMTSTLQQEAARKLRFSSERTMRVAQRLYENGYITYMRTDSTTLSASAISAARTQATELY
GPEYVHPSPRQYTRKVKNAQEAHEAIRPSGDVFQTPGQLHSALQTDEFRLYELIWQRTVA
SQMADVRGTTLTLRITGTAGTGEECTFSASGRTITFAGFLKAYVESVDDQAGGQSDDAES
RLPALVQGQAVTATQLDPDGHTTNPPARFTEASLIKTLEELGIGRPSTYSSIIKTILDRG
YVYKRGSALVPSWVAFSVVALLEAHFGRLVDFDFTAGMEDDLDAIAGGRERRGNWLQSFY
FGGDTGAEGSVARSGGLKKMVGQNLEEIDARTINSIRLFDDSEGREIHVRVGRYGPYLER
MVRNDDDPDGDPISQRANLPDDLPPDELTIDFAEKLFATPQEGRKLGVDPLTGHDIVAKE
GRFGPYVTEILPEPEPEPTPPEPDIVPVPSGNDSDGGGGVKTAVKKAAAKKAPAKKAAAK
KATGPKPRTGSLLKSMDLATITLDDALKLLSLPRVVGVDPESKEEILAQNGRYGPYLKKG
TDSRSLADEDQMFTVTLEEALKIYAEPKRRGRQGEAKPPLREMGVDPISEKPMVIKDGRF
GPYVTDGETNASLRKDDDVESITDDRASELLADRRARGPVKKKAPAKKAAAKKAPAKKAA
AKKAPAKKAAAKKTATKTTAAKKAPVKKAPAKKTDSE
NT seq 2994 nt   +upstreamnt  +downstreamnt
gtggcagcacgtaacagcggcacgggggacagctccgccgagccacgtcgtctggtcatc
gtcgagtctccgaccaaggcaaagaagatcgccccgtacctcgggagcaactacgtcgtc
gaggcctccgtcggccacattcgcgaccttccccgcggtgccgcggatgttcccgcgaag
tacaagggtgagccctgggcgcgtctcggcgtggacgtcgaccacgacttcgaggccctc
tacgtcgtctcgccggagaagaagggcaaggtcgccgagctcaagagcctgctcaaggac
gccgacgagctctatctcgccactgaccccgaccgcgagggtgaggccatcgcctggcat
ctcctcgagaccctgaaccccaagatccccgttcgacgcatggtgttccacgagatcacc
aagccggccatcctcgccgccgcggccgatacccgcgacctggaccaagacctggtcgac
gcccaggagacgcgtcgtatcctcgaccgtctctacggctacgaggtcagcccggtgctg
tggaagaaggtcatgccgaagctctcggcaggccgagtgcagtccgtcgccacccgcatc
gtcgtccagcgtgagcgcgagcggatggctttccgcagcgcggagtactgggacatctcc
gccacgctcgacgccggagccgaggcaacgccgcgcagtttcggtgcccgtctggtcaat
gtcgacggcaatcgcgtcgccgccggtcgcgacttcggggccgacggcaagctcaagtcc
gatgcagtgaccgtcctcgacgaaccccgtgcccgacgcctcgccgaggctctcgagggc
gtcgatctgacggtcgcgtccgccgaggacaagccctacacccgcaagccctacccgccg
ttcatgacgtcgacgctgcagcaggaagccgcccgcaagttgcgcttcagctccgagcgc
accatgcgggtcgcgcagcggctgtacgagaacggctacatcacctacatgcgtaccgac
tcgacgacgctgtcggcgtcggcgatctccgcggcacgcacacaggcgaccgagctctac
gggccggagtacgtccatccctcgccgcggcagtacacccgcaaggtcaagaacgcgcag
gaggcccacgaggccatccgcccgtccggtgacgtcttccagacgcccggtcagttgcac
tcggccctgcagaccgacgaattccgactctacgagttgatctggcagcgcacggtcgcg
tcgcagatggccgatgttcgcggcaccacgctgactttgcgcatcaccggaacggccgga
accggcgaggagtgcacgttctccgcatccggtcgcaccatcacgttcgccggcttcctc
aaggcctacgtggagagcgtcgacgatcaggcaggcggacagtccgacgacgccgaatcc
cgtttgcctgccctggttcagggccaggccgtcaccgccacccagctcgatcccgacggc
cacaccacgaacccgcccgcacgattcaccgaggcgtcgctcatcaagacgctagaggaa
ctgggcatcggtcggccgtcgacgtattcgtcgatcatcaagaccatcctcgaccgcggg
tacgtctacaagcgcggcagtgcactggtgccgtcgtgggtggcgttctcggtggttgcc
ttgctggaggcgcacttcgggcgtctggtggacttcgacttcaccgcagggatggaggac
gacctcgacgcgatcgcgggaggccgtgagcgacgcggcaattggctgcagagcttctac
ttcggcggcgacaccggtgccgagggttcggtggcccgctccggtggtctgaagaagatg
gtgggccagaatctcgaagagatcgatgcgcgcaccatcaactccattcgcctgttcgac
gactccgaggggcgcgagatccatgtgcgcgtaggccgttacggcccgtacctcgagcgc
atggtgcgcaacgacgacgatcccgacggcgatccgatcagccagcgcgccaacctgccc
gacgatcttccgccggacgaattgacgatcgacttcgccgaaaagctgttcgccacaccg
caagagggccgcaaactcggtgtcgatccgctgaccggtcacgacatcgtcgccaaggaa
ggccgtttcgggccctacgtcaccgagatcctgcccgagccggaacccgaaccgacgccc
cccgagcccgacatcgtcccggtgccgtccggcaacgacagtgacggcggcggcggggtc
aagaccgcggtgaagaaggccgcggccaagaaagcaccggccaagaaggcggctgcgaag
aaggcgaccggccccaagccgcgcaccggttctctgctcaagtccatggatctggcgacc
atcacgctcgacgatgcactcaagctgctgtcgctgccgcgtgtcgtcggagtcgatccg
gagtccaaggaagagatcctcgcgcagaacggtcgctacggcccgtatctgaagaagggc
accgactctcgctcgctcgccgacgaggatcagatgttcaccgtcacgctggaagaggcg
ctcaagatctacgccgagcccaagcgtcgcggtcgtcagggtgaagccaagccgccgcta
cgcgagatgggcgtcgacccgatcagtgagaagccgatggtgatcaaggacggtcgcttc
gggccgtacgtcaccgacggtgagacaaacgccagcctgcgcaaggacgacgacgtggag
tcgatcaccgacgatcgcgcgtcggagttgttggcggacaggcgtgctcgcgggccggtg
aagaagaaggcaccggccaagaaggcggctgccaagaaggcaccggcgaagaaggccgct
gcgaagaaagctccggccaagaaagctgctgcgaagaagacggccaccaagaccactgcc
gcgaagaaggcaccggtcaagaaggctccggccaagaagaccgacagcgaatag

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