Rhodococcus sp. B7740: NY08_4865
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Entry
NY08_4865 CDS
T03776
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NY08_4865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhb03021
]
NY08_4865
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_4865
Enzymes [BR:
rhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NY08_4865
Transcription machinery [BR:
rhb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NY08_4865
DNA repair and recombination proteins [BR:
rhb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NY08_4865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AJW42865
LinkDB
All DBs
Position
4935535..4938153
Genome browser
AA seq
872 aa
AA seq
DB search
MALELFKPFVMKRLVDLNHAQNIKSAKRMVERQRPQVWDVLEEVIAEHPVLLNRAPTLHR
LGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQMAVHLPLSAEAQAEARVLMLSSNNIL
SPASGRPLAMPRLDMVTGLYHLTRLDAGAVGERVDASTDQAEFGAYSSPAEAQMAVDRGA
LTVQSQIRVRLTTQRPPRDIENELFPEGWNRGDAWTAETTLGRVLFNELLPADYPFVNEQ
MPKKRQSTIINDLAERYPMIVVAQTVDKLKDAGFYWATRSGVTISISDVLVPPEKPQIME
TFEAQADQIEKKYQRGALDKVERNSALVKIWQDATEQVGKAMEAHFPDDNPIPMIVKSGA
AGNMTQVRSLAGMKGLVTNPKGEFIPRPIKSSFKEGLTVLEYFINTHGARKGLADTALRT
ADSGYLTRRLVDVSQDVIVRETDCGTERGIVTTIAEKTADGKMIRDAHVETSTYARTLAN
DAVDENGTVIVARGHDLGDPAIDALLAAGITSVKVRSVLTCTTGTGVCATCYGRSMATGK
LVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITGGLPRVQELFEARVPKGKAPI
ADVSGRIQLEDGDRFYKITIVPDDGGEEVVYDKLSKRQRLRVFKHDDGTERLLADGDHVE
VGQQLMEGAADPHEVLRVMGPRQVQIHLVNEVQEVYRSQGVSIHDKHIETIVRQMLRRVT
IIDSGSTEFLPGSLTERSEFESSNRRVVSEGGEPAAGRPVLMGITKASLATDSWLSAASF
QETTRVLTDAAINCRSDKLIGLKENVIIGKLIPAGTGINRYRNITVQPTEEARAAAYAVP
SYDDQYYSPDGFGQGTGAAVPLDDYGFSNEYR
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggctctcgagctgttcaagccgttcgtgatgaagcgcctggtggatctgaaccacgcg
cagaacatcaagtcggccaagcgcatggtcgagcgtcagcgtccgcaggtgtgggacgtt
ctcgaagaggtcatcgccgagcaccccgtgctgctgaaccgtgcacccaccctgcaccgg
ttgggcattcaggcgttcgagccgcagctcgtcgagggcaaggccatccagctgcacccg
ctcgtgtgtgaggcgttcaacgccgacttcgacggtgaccagatggctgtccacctcccg
ctgtccgccgaggctcaggccgaggcacgcgtgttgatgctgtcctcgaacaacatcctc
tcgccggcatcgggccgtccgctcgccatgccgcgtctggacatggtgacgggtctatac
cacctgacgcgtctcgacgccggtgctgtcggcgagcgcgtcgacgcatcgaccgatcag
gccgagttcggggcgtactcctccccggccgaggctcagatggccgtcgaccgtggagcg
ctcacggtgcagtcgcagattcgggttcgtctcaccacacagcgcccgccgcgtgacatc
gagaacgagttgttccccgagggctggaaccgcggcgacgcgtggaccgcggagaccact
ctgggacgcgtgctgttcaacgagctgcttccggcggactacccgttcgtcaacgagcag
atgccgaagaagcgtcagtcgaccatcatcaacgatctcgccgagcgttacccgatgatc
gtggtcgcgcagaccgtcgacaagctcaaggacgctggcttctactgggccacccgttcg
ggtgtcaccatctcgatctccgacgtcctcgtgccgccggagaagccgcagatcatggag
accttcgaggctcaggccgatcagatcgagaagaagtaccagcgtggcgcactcgacaag
gtcgagcgcaactccgcactggtcaagatctggcaggacgcgaccgagcaggtcggtaag
gccatggaggcccacttccccgacgacaacccgatcccgatgatcgtgaagtccggcgca
gccggaaacatgactcaggttcgctcgctcgccggcatgaagggcttggtgaccaacccg
aagggtgagttcatcccgcgtccgatcaagtcctccttcaaggaaggcctgacggttctc
gagtacttcatcaacacgcacggtgctcgtaagggtctggccgacacggcgcttcgtacc
gccgactcgggctacctgacgcgacgtctggtcgacgtctcgcaggatgtcatcgttcgg
gaaaccgactgtggcaccgagcgcggcatcgtcacgacgatcgccgagaagaccgccgac
ggcaagatgatccgcgacgctcacgtcgagaccagcacgtacgcccgcacgttggcgaac
gacgctgtcgacgagaacggcacggtcatcgtcgctcgcggacacgatctcggtgacccg
gccatcgacgcgctgctcgctgcgggcatcacgtcggtcaaggttcgctcggtgctcacc
tgcaccacgggaaccggcgtctgcgccacctgctacggccgctcgatggccaccggcaag
ctggtcgacatcggtgaggccgtcggtatcgttgccgcgcagtccatcggtgagcccgga
acccagctgaccatgcgtaccttccaccagggtggtgttgccggagatgacatcaccggt
ggtctgcctcgcgtgcaggagctgttcgaggcacgtgtgccgaagggcaaggctccgatc
gcggacgtgtcgggacgcatccagctcgaggacggcgatcgtttctacaagatcaccatc
gtcccggacgacggcggcgaagaggttgtctacgacaagctctccaagcgtcagcgtctg
cgcgtcttcaagcacgacgacggcaccgagcgccttctggcggacggtgaccacgtcgag
gtcggccagcagctcatggaaggtgctgccgatccgcacgaggtcctgcgtgtgatgggt
ccccgtcaggtgcagatccacctcgtcaacgaggtccaggaggtgtaccggtcgcagggt
gtgtcgattcacgacaagcacatcgagacgatcgtgcgtcagatgctccgtcgcgtgacg
atcatcgacagcggctccaccgaattcctgcccgggtcactgaccgagcgcagcgagttc
gagtcgagcaaccgtcgcgtcgtctccgagggtggcgagcccgcagccggacgtccggtc
ctgatgggtatcaccaaggcatcgctggccaccgactcgtggctgtcggctgcgtccttc
caggagaccactcgtgtgctgaccgatgcggcgatcaattgccgtagcgacaagctcata
ggtctcaaggagaacgtcatcatcggtaagctcatcccggctggtaccggcatcaaccgg
taccggaacatcacggtgcagccgaccgaggaggcgcgtgccgcggcatacgcggtgccg
tcgtacgacgatcagtactacagcccggatggcttcggccagggaaccggcgctgcagtg
ccgctcgacgactacggtttctccaacgaataccgctag
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