Rhodococcus sp. B7740: NY08_660
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Entry
NY08_660 CDS
T03776
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb03030
DNA replication
rhb03430
Mismatch repair
rhb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NY08_660
03430 Mismatch repair
NY08_660
03440 Homologous recombination
NY08_660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhb03032
]
NY08_660
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_660
Enzymes [BR:
rhb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NY08_660
DNA replication proteins [BR:
rhb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NY08_660
DNA repair and recombination proteins [BR:
rhb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NY08_660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
UVR
Motif
Other DBs
NCBI-ProteinID:
AJW38692
LinkDB
All DBs
Position
complement(680362..682158)
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AA seq
598 aa
AA seq
DB search
MSGVGPNVVAVSLPIQLTFDELDTPLHETTFVVVDLETTGGSADTEAITEIGAVKVRGGE
ILGEFATLIDPGRSIPPYIVELTGITSAMLIGAPRIERVLPGFLEFARGSVLVAHNAGFD
TGFLRAAASRLDIAWPRFQVLCTVKLARRVLTRDEAPSVKLSALSTLFRSGTRPTHRALD
DARATVDVLHGLIERVGNQGVHSYAELVDYLPAVSAGQRAKRGLAAHLPGTPGVYLFRGP
SDEVLYVGTSNNLKRRVRNYFTGSETRGRMKEMVALATRVDHVECAHALEAGVRELRLLS
AHVPPYNRRSKFPRKGWWITLTDEAFPRLSIVRTPTPNSLGPFSVRGDAAEAAALVAEFC
RLRTCTRRLARSVRHGDQCPATDVGGCPAALCGPLTADEYSDAPRQFLALVCGQDDAVLY
SMRRRVAELADKELFETAARLRDRIAITVDALRRMHRSAAVAAIAELVAAKRTADGGWEL
IVVRFGRLAGAAVAPRGVHPMPVVDAITASAETVLPDTTPLRGAPPEEVGLIAAWLRTDG
VRIVRTSSGYCSPARSAGSWESWCRTAREAARAGVEPAERPFKAGVEPAERLSGYGSH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgggggtcggccctaacgtcgtcgcggtgagcctgcccatccagctgacgttcgac
gaactcgacaccccgctgcacgagaccacgttcgtcgtcgtcgacctcgagaccaccggc
gggagcgcggacaccgaggccatcaccgaaatcggggcggtcaaggtacgaggcggcgaa
attctcggcgaattcgccaccctgatcgacccgggcagatccatcccgccgtacatcgtg
gaactgaccggcatcacatcggcgatgctcatcggcgcgccgcgcatcgaacgggttctt
cccggtttcctcgagttcgcacgcggttcggtgctggtggcgcacaacgccggcttcgac
acgggattcctcagagccgccgccagtcgtctcgacatcgcatggccgcggttccaggtg
ctgtgcacggtcaagctggctcgacgagttctgacgcgcgacgaggcaccttcggtgaag
ctgtcggcgctctccacactgttccgatccggtaccaggcccacccaccgcgcgctcgac
gacgcccgagcgaccgtcgacgttctgcacggactcatcgaacgggtgggcaatcagggg
gttcacagctacgccgagttggtcgactacctacccgcggtgtcggccggccagcgcgcc
aaacgcgggctggctgctcaccttcccggtacgcccggcgtctatctgttccgcggcccg
tccgacgaggtgctgtacgtcggtacgtccaacaacctcaagcggcgtgtgcgcaactac
ttcaccggttcggagacgagaggccggatgaaggagatggtcgcactggcgactcgcgtc
gaccacgtcgagtgtgcgcacgcgctcgaagccggggtccgcgagttacgtctgctctcg
gcgcacgtcccgccgtacaaccgccgctcgaagttccccaggaaggggtggtggatcacc
ctgaccgacgaggcgttcccccgcctgtcgatcgtccgcacaccgacaccgaacagtctc
ggaccgttctcggttcgcggcgacgccgcagaggccgctgcgctcgtcgccgagttctgc
cgcctgcgaacctgcactcgccgactcgcgcgctcggttcgacacggcgaccagtgcccg
gcaacagacgtcggaggctgccctgcggcactgtgcggcccgttgacggccgacgagtac
tcggacgccccgaggcagtttctcgcgctcgtgtgcggtcaggacgatgccgtgctgtac
tccatgcgccgccgcgtcgccgagctcgcggacaaggagctgttcgagacggccgctcgt
ctgcgtgatcgaatcgcgatcaccgtcgatgcactacgcaggatgcaccgatcggcggcg
gtggccgccattgccgaactcgttgcggcgaaacgaacggccgacggcgggtgggagttg
atcgtggtgcgcttcggccgtctggccggcgctgccgtcgcaccgcgcggagtgcatccg
atgcctgtcgtcgatgccatcaccgcgtcggccgaaacggtgctgcccgatacgacgccg
cttcgcggtgcgccgccggaagaagtgggactgatcgcggcgtggttgcgcacggacgga
gtccggatcgtgcgcacgagcagcgggtactgcagcccggcacggtcggcgggttcgtgg
gagtcgtggtgtcggacggcgagagaagcagcgagggcaggagtggagcctgcggaacga
ccgttcaaggcaggagtggagcctgcggaacggctttcgggatatggcagccattag
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