Rhodococcus sp. BH4: A0W34_10970
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Entry
A0W34_10970 CDS
T10984
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhbh Rhodococcus sp. BH4
Pathway
rhbh03420
Nucleotide excision repair
rhbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0W34_10970
03430 Mismatch repair
A0W34_10970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhbh03400
]
A0W34_10970
Enzymes [BR:
rhbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0W34_10970
DNA repair and recombination proteins [BR:
rhbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0W34_10970
MMR (mismatch excision repair)
Other MMR factors
A0W34_10970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
C1_1
Motif
Other DBs
NCBI-ProteinID:
ARE33790
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Position
2380507..2382645
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AA seq
712 aa
AA seq
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MMVPMPADTGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVADGHVSAGQVLA
VTFTARAAGEMRGRLRELGVGGSGPQVQARTFHAAALRQLKYFWPQVVGDTPWRLLDRKF
AVVSSAAARVGLSTSTESVRDLASEIEWSKASLIAPEDYPRAIAKIRREAPVDATKVAQV
YAAYEELKARGQDGMLLDFDDLLLHTAAALEEHSTVADEFRERYRCFVVDEYQDVTPLQQ
RVLDAWLGDRDDLTVVGDANQTIYSFTGATPNYLLDFSRKFPEATVVRLERDYRSTPEVV
SLANRVIGAARGRIAGTRLQLIGQRAPGPEPEFMEFDDEPAEALGVARAIKRLIAAGTPA
AEIAVLYRINAQSEAHEQALTKLGIPFQVRGGEGFFTRTEVRQAVAALRQAAGRDDLPEG
ADNGEALVSLVRAVLAPLGLTNDEPSGTQARERWASLSALVALTEEQLVHEPELTLTGLL
QELTARAEARHPPTVQGVTLASLHAAKGLEWDAVFLVGLNDGTLPIQHVLGDANSGADDV
AVEEERRLLYVGVTRAREHLQLSWALARNEGGRKSRRRSRFLNGLIPEDSPASRVAAPSS
GNKKRPRCRVCGKPLIGTSATMLGRCEKCPSNVDLELLEHLKAWRLDKSRELKVPAYVVF
SDNTLMAIAEQRPQDNRGLVSIPGIGPKKLDNFGEDVLAVIRGELRAATLDI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccccatgcctgcggacaccggactggatccagaacaatcggccgccgtgctc
gcgccacgcggcccggtatgtgtcctcgcgggcgctggaacaggcaaaacccgcaccatc
acgcgccggatcgctcatctggttgccgacggtcacgtgtcggccggtcaggtgcttgcc
gtgacgttcaccgctcgtgcggccggggaaatgcgtggacgtctccgtgagctgggcgtc
ggcgggagtgggccgcaggtgcaggctcgaacttttcacgctgctgctctccgtcaactg
aagtacttctggccgcaggttgtcggcgacacgccgtggcgtctgctggaccgaaagttc
gcggttgtcagcagtgccgcagcccgggtgggattgtccaccagcacggaaagcgtccgc
gacctcgccagtgaaatcgagtggtcgaaggcgtcgctgatcgcgccggaggattaccca
cgcgcgatcgccaagattcgccgtgaggcaccggtcgatgccaccaaggtggcccaggtg
tatgccgcatacgaagagctgaaagcacgcggccaggacggcatgctgcttgatttcgac
gatctcctactgcacacggcggcagctctcgaagagcattcgacagtcgccgacgagttc
cgcgagcggtatcgctgcttcgtcgtggacgagtatcaggacgtcaccccacttcagcag
cgtgtgctcgacgcctggctgggcgaccgagacgatctgaccgtggtgggcgatgcgaat
cagaccatctactccttcaccggagccacccccaactatctgttggacttctcccggaaa
ttccccgaagcgaccgtcgttcggctcgaacgggattaccgctccacccctgaggtcgtg
tcgttggcgaaccgcgtgatcggtgccgcgcgcgggcggatcgccgggacgcgtctgcag
ctgatcgggcaacgcgctccggggcctgagccggagttcatggagttcgacgacgagccg
gccgaagcactcggcgttgcgcgggcgatcaaacggctgatcgcggcaggcacccctgcg
gccgagatcgctgttctgtaccggatcaatgctcagtcggaggcgcacgagcaggccctg
acgaagctgggcattccgttccaggtgcgcggtggagagggcttcttcactcgcaccgag
gtacgtcaggcggtggcagcgctgcgtcaggctgctggacgcgacgacctccccgaaggt
gcagacaacggcgaagcgctggtctcactcgtccgcgctgtgctcgcgccgctcggcctg
accaacgacgagccttcgggtactcaggcacgcgagcgctgggcgtcgctctcggctctc
gtggcgctcaccgaagaacaacttgtccacgaacctgaactgacgctcaccgggcttcta
caggagctcacggcccgagccgaggcgcggcacccaccgaccgtgcaaggtgtgacgctg
gcctccctccacgcggccaaggggctcgaatgggatgcggtgttcctggtcggcctcaac
gacggcaccctgcctatccaacacgttctcggcgacgccaattcgggcgccgacgacgtc
gcggtggaggaggagcgtcggcttctctacgtgggggttactcgcgctcgcgagcatctg
cagctgtcgtgggcattggcccgcaatgagggtggacgcaagtcccgtcgccggtcgagg
ttcctcaacgggctcatccccgaggactcgccggcttcgcgcgtcgccgcgccgtcgtcg
gggaacaagaagcgtccgcgctgccgcgtctgcgggaaaccgttgatcgggacgtcggcg
accatgctcgggcgctgcgaaaaatgcccgtccaatgtcgacctggaattgctcgagcac
ctcaaggcctggcgtctggacaagtccagagaactcaaagttccggcctatgtcgtcttc
agtgacaacacactgatggctattgccgaacaacgaccacaagataatcgtggactggtt
tcgatccctggaatcggtccgaagaaactcgacaacttcggggaagacgtactagctgtc
attcgcggtgaactgcgagcggcaacactcgatatctga
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