Rhodococcus sp. BH4: A0W34_13065
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Entry
A0W34_13065 CDS
T10984
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhbh Rhodococcus sp. BH4
Pathway
rhbh00300
Lysine biosynthesis
rhbh00470
D-Amino acid metabolism
rhbh01100
Metabolic pathways
rhbh01110
Biosynthesis of secondary metabolites
rhbh01120
Microbial metabolism in diverse environments
rhbh01230
Biosynthesis of amino acids
Module
rhbh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhbh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A0W34_13065
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A0W34_13065
Enzymes [BR:
rhbh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
A0W34_13065
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CusF_Ec
Motif
Other DBs
NCBI-ProteinID:
ARE37234
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Position
2827317..2828186
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AA seq
289 aa
AA seq
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MDFSKGHGTQNDFVVLPDLDVRVDLEPARVSALCDRQRGLGADGILRVARAGALADAGVL
GALPDGVAAEDWFMDYRNSDGSIAEMCGNGVRVFAHYLKASGLESKDEFVVGSRAGARPV
VVHGYDATHGDVTVAMGPIKDLGTSSATIDGRVFAGVGIDVGNPHLACVDEHVTAEVLSA
LDLSVSPGFDPGFFPHGVNIEIVTPIHDGGVHMRVHERGVGETRSCGTGTVAAAAAALRY
DGRDEGSVLVRVLGGEVQVTVEGGKGSLRGPSVLVASGTISDAWWQSLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagtaagggccacggcacgcagaacgacttcgttgttctccctgacctcgac
gttcgggtcgatctcgagccggcgcgagtttcagcgttgtgtgatcgtcagcgtggcctc
ggcgccgacggcatccttcgtgtcgcccgggcaggcgcacttgcggacgcgggcgtgctc
ggtgcgctgcccgacggcgtcgctgccgaagactggttcatggactaccgcaacagcgac
ggctccatcgcggagatgtgcggaaacggagttcgcgtattcgcccactatctcaaggcc
tcgggcttggagagcaaggacgagttcgtggtcggcagccgcgccggagcgcgtccggtc
gtggtgcacggctacgacgccacacatggtgacgtgaccgtggcgatgggcccgatcaag
gacctcggcaccagttcggcaacaatcgacggccgcgtcttcgccggcgtcggcatcgac
gtcggtaatccgcatttggcgtgtgtcgacgagcacgtgacggcagaagttttgagtgcg
ctcgatttgagtgtttctccgggcttcgatcccgggttcttcccgcacggggtcaacatc
gagatcgtgacgccgatccacgacggtggggtccacatgcgcgtacacgagcgtggtgtg
ggcgagactcgttcctgcggaaccggaacggtcgcagctgcggccgcggcgctgaggtac
gacggccgcgatgaaggctcggtactggtgcgcgtgctcggcggcgaggtacaggtcacc
gtcgaaggcggcaaagggtcgttgcgggggccctcggttctggtggcgagcggaacgatc
agcgacgcgtggtggcaatcgcttgtgtga
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