Rhodococcus sp. BH4: A0W34_16855
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Entry
A0W34_16855 CDS
T10984
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rhbh Rhodococcus sp. BH4
Pathway
rhbh00470
D-Amino acid metabolism
rhbh00550
Peptidoglycan biosynthesis
rhbh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhbh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A0W34_16855 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A0W34_16855 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhbh01011
]
A0W34_16855 (murD)
Enzymes [BR:
rhbh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
A0W34_16855 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhbh01011
]
Precursor biosynthesis
Amino acid ligase
A0W34_16855 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ARE34784
LinkDB
All DBs
Position
complement(3703269..3704792)
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AA seq
507 aa
AA seq
DB search
MTSSADSENDLSWLRGTRVLVAGGRVSGQATIEPLVALGAVVTVADSTLDFAERCAELGA
DMVTTTSIEDAPDSITEYGLVVTSPGFRPDAPILAAAAGHGIPIWGDVEFSWRVDHSGHF
GTPRKWLVVTGTNGKTTTTSMLASILDAAGVVGRACGNIGLPILDALAETSPRVEYLAVE
LSSFQLHWAPSVRPDAGVVLNVAEDHLDWHGGMSAYAEAKSRALSGKVAVVGLDDAIASE
LGTRATADIVTGFRLGEPGEGELGVEAGHLVDNAFGDHVRLAEAASIDPAGPAGVMDALA
AAALARALGFEADVVERGLAAHKVGPHRGALVGRVGSVVYIDDSKATNPHAARPSILAHD
RVVWVAGGLLKGASVDQLVSEVGPRLSGAVLLGRDAGVIEDALARHAPDVPVVHVMSGDD
AVVSENSSNSTLTIRLPSGADADAVMAAVVVEAAELASPGDAVVLAPAAASLDMFASYGH
RGDSFAAAVAALPDPFTDSPGQAGNLR
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctcagcggattccgagaacgacctgtcctggctccgcggtacgcgagtgctg
gtcgccggtgggcgggtgtccggtcaagcgaccatcgaacctctcgtcgccctcggtgct
gtcgtgacggttgccgattcgaccttggacttcgcggagcgctgcgcggagctcggcgcg
gacatggtgaccaccacctcgatcgaggatgccccggattcgatcaccgagtacgggctc
gtcgtcaccagtccgggctttcggccggatgcaccgatccttgcagccgccgccggtcac
gggattcccatctggggagacgtcgagttttcctggcgcgtcgaccacagcgggcacttc
ggcacaccccgtaaatggctcgtcgtgacggggacgaacggaaagaccacgacgacgtcg
atgctggcctcgattctcgacgccgctggagttgtcggccgagcctgcggaaacatcggg
ctaccgatactcgacgcactcgccgagacgtcgccgcgcgtggagtacctcgctgtcgaa
ctgtcgtccttccaattgcactgggcgccttcggtgcgtccggatgccggcgtggtcctc
aacgtcgccgaggatcacctcgactggcacggcggaatgagcgcgtacgccgaggccaag
tcacgggcgctgagcggaaaggtcgcggtggtcggcctcgatgacgcgatcgcttccgaa
ctgggaactcgcgcaactgcagacattgtcaccgggttcagattgggtgaaccgggcgaa
ggagaactgggtgtcgaagcgggacacctcgtggacaacgcattcggcgatcacgtccgc
ttggccgaagcagcgtcgatagatcccgccggcccggcaggcgtcatggacgcgctggcc
gccgccgccttggcgcgggcactcggattcgaggcagacgtcgtcgaacgcggtctggcc
gcacacaaggtcggcccacaccgaggggcgctggtcggccgtgtcgggtccgttgtgtac
atcgacgattccaaggccaccaatccgcacgcagcccgaccgtcgatactcgcgcacgat
cgcgtcgtctgggttgcaggcggtctgctcaagggagccagcgtcgaccaattggtgagc
gaagtcggccctcgactctccggcgctgtccttctcgggcgtgacgctggtgtgatcgag
gacgcgctcgcgcgacacgcgcccgatgttcccgtggtgcacgtgatgtcgggggacgat
gcagtggtgagcgaaaacagcagcaactcgactctcaccatccggctgccgtcgggtgcc
gacgcggatgccgtcatggccgcagtggtagtcgaagctgccgagttggcgtcccccggt
gatgcagttgtactcgccccggccgccgcgtccttggacatgttcgccagctacggacat
cgtggtgacagcttcgccgccgccgtcgccgcattacccgatccgttcacggattcgcct
ggccaagccgggaacttgcgatga
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