Rhodococcus sp. BH4: A0W34_20240
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Entry
A0W34_20240 CDS
T10984
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rhbh Rhodococcus sp. BH4
Brite
KEGG Orthology (KO) [BR:
rhbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhbh03400
]
A0W34_20240
DNA repair and recombination proteins [BR:
rhbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A0W34_20240
Archaeal homologous recombinant proteins
A0W34_20240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
CEP63
ZapB
AAA_16
AAA_15
TsaE
Motif
Other DBs
NCBI-ProteinID:
ARE35351
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All DBs
Position
complement(4457552..4460530)
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AA seq
992 aa
AA seq
DB search
MRLHKLEVSSFGPFADTVEVDFDRLGADGLFLLHGDTGAGKTTILDAVAFALYGRVPGAR
NEGKRLLSDHAPAGSVPRVELEATISGRRIKLVRSPEYSRPKKRGTGSITENAKATLTWL
DGRGENLSRIPDIGDEINRLMGMSADQFFQVVLLPQGEFAKFLRAESDERGKLLERLFDT
KRFVSVEAWFDAKRKASATALAAREQSVRLLLAKVETAAGLEVGAEAHPLEWSRKLLAEA
QDTRDTSLAELVTAKDAAAEANRVLTVAQRTADLVARRNRATAELAAFNTGTAQRAVIGA
ELETAKRALPVAAVAGDVDAAGLHLAAALESMTAAMSTYSATGGPEIFVPEVWPPTDDER
QRVVARIRTWRDEIVRLDAMAEDARRADAAEAEIEKLGVRRDALSERIDAIAVERTQLPE
MVRSAGQRLEDAQRAHAALPGLEAALAKASDAAAAGHEFVSLRTQAEKIRVQVLDARDAH
QSARGRWLDLVQKRIEGMAAELASSLAPGDPCQVCGSREHPAPAQSDVVTVTEPDLEVAS
AAERAAEKALSKVVDRQVTVDRDIDRVIARGGDGDVAELDRLRAAARNAVDEATHSAGQV
GGLADKLGHLNERDGELQQESASLTAELAALTERTTTLSAAVEQIRAAIVAAVGEDSTIA
AQRSRFERLASAASAASEMRDDAVRAQARSAELSTKLAAAAAAAGFDSVEAAIEGVRSPA
RIAAIETELAKARDLEVAARTVLDDPEVVAVSEVETVDVDGPRERALQCAEVVNSAVAAA
SLAENRVSDLERFSGQLEKAYEAVAPERELHDELAGLADVIAGKGQNSRKMSLRAYVLAS
RLEEIAVSASVRLQRMSGGRYEFVHSDEAGSRGRRGGLGLDIRDDFTGVVRSAKTLSGGE
SFLASLSLALGLADVVAAESGGIVLDTMFIDEGFGTLDADTLDSVMAVLDELRDGGRVVG
IVSHVDEMRQRIPSRLHVIRGRAGSSVKVIAG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
gtgaggctgcacaaactcgaagtcagctctttcgggcccttcgccgacacggtcgaggtc
gacttcgaccgtttgggtgcagacgggctgttccttctgcacggtgacaccggggcaggc
aagaccacgatcctcgacgcggttgcgttcgccctgtacgggcgggtgccgggtgcgcgc
aacgagggcaagcgattgttgtccgatcacgcgcccgccggttcggtgccgcgcgtggaa
ctcgaagcgaccatcagtggtcgcagaatcaaacttgttcgtagtccagagtattcgcgt
ccgaagaagcgcgggaccggttcgatcacagagaatgcaaaggccacactgacgtggttg
gacggccgcggcgagaatctttcgcgcatccctgacatcggtgacgagatcaaccgcctc
atgggcatgagcgctgatcagttcttccaggtggtgctcttgccgcagggtgagttcgcc
aaattcctgcgtgccgagagtgacgagcgaggcaaactgctcgagcgtctgttcgacacc
aagcgttttgtctccgtcgaggcatggttcgacgccaagcgaaaggcaagtgcgaccgcg
ctcgcggcaagggagcaatccgtgcggctgctgctcgcgaaggtcgagacagctgcggga
ctcgaggtaggcgccgaggcacacccactggaatggtcgcgcaaactcctcgccgaggct
caggacacccgcgatacaagtcttgcggagctggtgaccgcgaaagatgcagcagccgag
gctaatcgggtgctcaccgttgcgcagcgaaccgcagatctggtcgctcgccgtaatcgt
gcgaccgctgaactcgcagcattcaatacgggcaccgcccaaagagctgtgatcggcgct
gaactcgagaccgccaagcgcgcactgccggtggccgctgtcgccggcgatgtggacgct
gccggcttgcacctcgctgccgcactcgaatcgatgaccgcagcgatgtcgacctactcc
gcaacgggcggtccggagattttcgtgccggaggtgtggccacccaccgacgacgagcgt
caacgcgtcgtagctcggatccggacctggcgtgacgagatcgttcgcctggacgcaatg
gcggaggatgctcgcagagccgatgcggcagaagccgagatcgagaaactcggagttcgg
cgagacgctctgtccgagcgcatcgatgccatcgcggttgaacgcactcaactgccagaa
atggtgcgctcggccggccaacggctggaggatgcgcaacgcgcgcacgcggctctgccc
ggcctcgaagctgcactggccaaagcatcggatgctgcggcagcgggtcatgaattcgtc
tctctgcgtacgcaagccgagaagattcgtgtgcaggtgttggatgcgcgcgacgcccat
cagagtgctcgcgggcgctggctcgacctcgtgcagaagcgtatcgagggcatggctgcg
gagttggcgagttcactcgcgcccggtgacccatgccaggtgtgtggttcgcgtgaacac
cctgcgccggcgcagtctgatgtcgtgacggtcaccgagcccgatctggaagtcgcgtcc
gcagccgagcgtgcggctgagaaagccctgagcaaggtagtcgaccgccaggtaaccgtc
gaccgtgacatcgaccgggtgatcgcccgcggcggggacggcgacgtcgcagaactcgac
aggctccgcgccgcggctcggaacgccgttgacgaggcgacccactctgccggtcaggtt
ggagggttggccgacaagctcgggcatctcaacgagcgtgacggcgagctgcaacaggaa
tccgcttctctgacggccgaattggcggcactgaccgagcgtacgacgactctgtcggcc
gcggtcgagcagattcgagcggcgatcgtcgctgcggtgggagaagattcgaccatcgct
gctcagcgctcgcggttcgaaaggcttgcctccgctgcctcggcggcgtctgagatgcgt
gacgacgccgttcgtgcgcaggcgcgatcggcggaactgtcgaccaaactggccgctgcg
gcggccgctgctggattcgattcggtcgaggctgcgatcgaaggggtgagatcgccggcc
cgaatcgcggcgatcgaaacggaactcgccaaggcacgcgacctcgaggtggccgctcgg
acggtcctcgacgaccccgaggtcgttgcggtgagcgaagtcgagacagtcgacgtcgac
ggtcctcgcgagcgtgctcttcagtgcgccgaggtggtgaactcggctgttgcagctgct
tccctggccgagaaccgtgtgtcggatctcgaacggttcagcggacaactcgagaaagca
tacgaagcggttgcacctgagcgggaactgcacgacgaactcgctggcctcgccgacgtg
atcgccggtaaagggcagaacagtcgcaagatgtcgctgagggcttatgtactcgcgtcg
cggttggaagagatcgcggtgtcggcatcggttcggctgcagcggatgtccgggggcaga
tacgagttcgtgcacagtgacgaggcaggttctcggggtcgccgcggcggtctggggctc
gacatccgggacgacttcacgggtgtcgttcgctcggcgaagacgctctcgggcggtgaa
tcattcttggcgtcattgtctttggccctcggacttgccgatgtggttgcggcggagtcc
ggcggaatcgttctcgacacgatgttcatcgacgaaggattcggcactctcgacgccgac
accctcgactcggtgatggctgtgttggacgagcttcgcgacggtggacgagtggtgggc
atcgtcagtcacgtggacgagatgaggcagcgaatcccgagtcgcctgcacgtcattcgc
ggacgtgcaggctcctcggtgaaggtgatcgcgggctga
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