Rhodococcus sp. BH4: A0W34_21980
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Entry
A0W34_21980 CDS
T10984
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhbh Rhodococcus sp. BH4
Brite
KEGG Orthology (KO) [BR:
rhbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhbh03400
]
A0W34_21980
Enzymes [BR:
rhbh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A0W34_21980
DNA repair and recombination proteins [BR:
rhbh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A0W34_21980
Prokaryotic type
A0W34_21980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ARE35652
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All DBs
Position
complement(4821134..4822480)
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AA seq
448 aa
AA seq
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MSNSVIWFRRDLRVGDLPTLTAAADAGGQTLGLFVLDEKLLGPAGSPRQNQLLANLSALD
NQLDGRLMVVRGDPADVVPRVAESVGAEEVHISGDYGPYGRRRDAAVAEKVELIATGSPY
AVAPGRVTKADGDPYKVFTPYFRQWMEHGWRGPASTDAGTVRWFDPSEKDGGPRRVSIPA
PSGTVSDVVGEAGALEQWKEYCENDLDRYDDERNRPDLDTTSRMSIPLKYGTIHPRTMLA
DLSKRLGDGAQAYRRQLAWRDFYADILFQRPDSARKNYDDKFDRLRHDGGVDADAAFTAW
CEGKTGFPIVDAGMRQLAAENWMHNRVRMIVASFLVKDLHIPWWRGARYFMSQLVDGDLA
SNQHGWQWTAGSGTDASPFFRVFNPITQGEKFDPDGTYVRRWVPELRDVPGKAVHSLKAM
RPVDYPDPIVDHAHEREEALRRYGEIKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaactctgtgatctggtttcgacgcgatctgagggtcggtgatcttccgactctg
actgcagcggcggatgccggcggacagacgttgggtttgttcgtcctcgacgagaagttg
ctcggaccggcaggctcaccccgccagaatcaactgctcgccaacttgtcggcactcgac
aaccagctcgacggacgattgatggttgttcgaggtgatccggcagacgtggtgccccgc
gtggcggaatccgttggcgccgaagaagttcacatcagtggcgactacgggccctacggc
cgacggcgcgacgcggccgtggccgagaaggtggagttgatcgccaccgggtcaccatat
gccgtggcgcccggacgcgtcaccaaggcggacggtgatccgtacaaggtgttcacgccg
tacttccgtcagtggatggaacatggttggcggggccccgcgtcgaccgatgcggggacg
gtccgttggttcgatccgagcgagaaggacggtggcccgcgccgagtgagtatccccgcg
ccgtccggcaccgtcagcgatgtcgtcggtgaggccggtgcgctcgaacagtggaaagaa
tactgcgagaacgatcttgaccggtacgacgacgaacgaaatcgacccgacctcgacacc
acgagtcggatgtcgatcccgctcaagtacggcacgattcatccgagaaccatgttggca
gatctctccaagcgactcggagacggcgctcaggcgtaccgtcgccagcttgcttggcga
gacttctacgcggacatcctgtttcagcgccccgacagcgcgcggaagaactacgacgac
aagttcgaccgtttacgtcacgacgggggagtcgacgcagacgccgccttcacggcctgg
tgtgaaggcaagaccggcttcccgatcgtggatgccggcatgcggcaactcgccgccgag
aactggatgcacaatcgggtccgaatgatcgtcgcgtcattcctggtgaaggacctgcac
attccgtggtggcgcggcgcacggtacttcatgtcgcaactggtggacggtgacttggcc
tccaatcagcacgggtggcagtggactgccgggtcgggtacggatgcttcgcccttcttc
cgcgtcttcaacccgatcacgcaaggggagaagttcgatcccgacggcacatacgtccgt
cggtgggtccccgaacttcgcgatgttcccgggaaggccgtccactcgttgaaggcgatg
cgcccagtcgactacccggacccgatcgtcgatcacgcgcacgagcgtgaggaggccttg
cgccggtacggcgagatcaaaggctga
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