Rhodococcus sp. BH4: A0W34_24060
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Entry
A0W34_24060 CDS
T10984
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhbh Rhodococcus sp. BH4
Pathway
rhbh03030
DNA replication
rhbh03430
Mismatch repair
rhbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0W34_24060
03430 Mismatch repair
A0W34_24060
03440 Homologous recombination
A0W34_24060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhbh03032
]
A0W34_24060
03400 DNA repair and recombination proteins [BR:
rhbh03400
]
A0W34_24060
Enzymes [BR:
rhbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A0W34_24060
DNA replication proteins [BR:
rhbh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A0W34_24060
DNA repair and recombination proteins [BR:
rhbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A0W34_24060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ARE36021
LinkDB
All DBs
Position
5252074..5252754
Genome browser
AA seq
226 aa
AA seq
DB search
MSSWSDRPICAFDLETTGRDPSTARIVSACVAVIDGSSVETRTWLLDPGVDIPAGASAVH
GISTEFAAQHGQDYSEGYEEIREALHNSWARDHAVVAFNASYDLTVMHAEGLRIGKPAFV
PGLVIDPYVIDRAMDTFRKGKRTLAAVCEHYGISLESAHEAEADAKAAAALARELAVRFP
DILGLDLMVDQADWHAERQRDFAEYLLSQGRDVADVNGQWPIRIIA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctggtccgatcgcccgatctgcgcgttcgacctcgagaccacggggcgggat
ccgtcgaccgctcgtatcgtcagtgcctgcgtcgcggtgatcgacggttcgagtgtcgaa
acacgcacgtggctactcgatcccggcgtcgacatccccgccggcgcctcggctgttcac
ggcatcagcaccgagttcgcggcgcaacacggccaggattattccgagggctacgaagag
attcgcgaggctctgcacaattcctgggcgcgcgatcacgccgtcgtggcgttcaatgcc
tcctatgatctgacggtcatgcatgccgagggtctgcgcatcggcaagcctgcattcgtt
ccggggttggtgatcgatccgtacgtgatcgatcgggcgatggatacgttccgcaagggc
aagcgaacgcttgcggccgtgtgcgagcactacggaatttcattggagtcggcgcacgaa
gccgaggccgatgccaaagctgcggcagcgttggcccgcgagttggccgtgcggttcccc
gacatcctggggctcgatctcatggtcgatcaagccgattggcacgccgagcggcaacgc
gatttcgccgagtaccttctcagccaagggagggacgtggcagatgtgaacggccagtgg
ccgattcgcatcatcgcctga
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