Rhodovulum sp. P5: RGUI_0019
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Entry
RGUI_0019 CDS
T04813
Name
(GenBank) Exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rhc
Rhodovulum sp. P5
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_0019
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RGUI_0019
Archaeal homologous recombinant proteins
RGUI_0019
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
ATP-grasp_2
NNH6
Motif
Other DBs
NCBI-ProteinID:
ARE42482
UniProt:
A0A1V0Q247
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All DBs
Position
pRGUI03:26897..27988
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AA seq
363 aa
AA seq
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MGLSLEEDHEVILGQILEALVVERADVLVIAGDVFDRASPPNSSIRQFNRFLKRVAEETE
AAVVMISGNHDSGDRIEAMSVFSTASRVLVRGIADAVEAPLVLRDAQGEVAFSALPFSYE
YAAREVFRDESINAPAEVVAAQIAAARRQVPDGARWVVVAHAFVAGGAVGETERALTRVG
GIETVPSDVFDGADYVALGHLHKPQEVSASHIRYSGAPLAFGFDEAGNEKSMTVVDLKAE
GVEIRIVPFRPIRQVRSLTGAFSDLLEGTPSDDFIQAILTDENPLIDPMKRLRATYPNAC
HLAYARQERAAETKALGSGRAAVTPIEMIGDFVKVVRGREPNATEVAIVAEKLHAVTSGE
EQT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggggttgagcctcgaggaggatcatgaggttatcctgggtcagatccttgaagcgctt
gtggtcgaacgagccgatgttcttgtcatcgcgggggacgtttttgaccgtgcctctccg
cccaattcatcgatccggcagttcaatcgcttcctcaagcgtgtagcagaggagaccgaa
gccgctgtggtgatgatctctggaaaccacgattctggcgacaggatcgaggctatgtct
gtcttttccaccgcgtctcgtgtgctggtgcgggggattgccgatgcggtggaagcgccg
ctggtgctgcgtgacgcgcagggcgaggtcgccttttccgcactgcccttttcctatgaa
tacgccgcacgcgaggtgttcagggatgaaagcattaatgcgccggcggaggtagttgcc
gcccagatcgctgcggcaaggaggcaggtgcctgatggagcgcgttgggtcgtcgtggcc
catgctttcgtcgcggggggtgcggtcggcgagaccgagcgcgccctgacgcgagtcgga
ggcatagaaactgttccctccgatgtcttcgatggggcggactatgttgcactggggcat
ttgcacaagccgcaggaagtgagcgctagccatattcggtactccggcgcaccgcttgct
ttcggtttcgacgaggcgggaaacgaaaaatccatgaccgtcgtcgatctgaaagctgaa
ggggtcgagatccgcatcgtaccgttccgaccgatccggcaggttcgctcgcttaccggg
gcattctcggatctcctggaaggaacgccgtctgacgatttcatccaggctatcctgacg
gatgaaaaccctctgatcgatccgatgaaacggttacgcgcgacctatcccaatgcttgc
catctggcctatgcccggcaggagcgcgctgcggagaccaaggcgctcggcagcgggcgg
gccgcggtcacgccgatcgagatgattggcgacttcgtgaaggttgtgcgcggccgggaa
ccaaacgccaccgaagtcgcgatcgtcgcggaaaagctccacgcggtaacctccggggag
gagcagacatga
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