Rhodovulum sp. P5: RGUI_0616
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Entry
RGUI_0616 CDS
T04813
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc00020
Citrate cycle (TCA cycle)
rhc00190
Oxidative phosphorylation
rhc00650
Butanoate metabolism
rhc00720
Other carbon fixation pathways
rhc01100
Metabolic pathways
rhc01110
Biosynthesis of secondary metabolites
rhc01120
Microbial metabolism in diverse environments
rhc01200
Carbon metabolism
Module
rhc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RGUI_0616
00650 Butanoate metabolism
RGUI_0616
09102 Energy metabolism
00190 Oxidative phosphorylation
RGUI_0616
00720 Other carbon fixation pathways
RGUI_0616
Enzymes [BR:
rhc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RGUI_0616
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ARE38757
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Position
complement(510308..512113)
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AA seq
601 aa
AA seq
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MAAYDFETHDYDVVVVGAGGAGLRATLGMAEQGLRTACITKVFPTRSHTVAAQGGIAASL
GNMGPDSWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQR
PFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKQKAEFFIEYFAIDLLMTEDGE
CQGVVAWKLDDGTIHVFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMVARAGLPLQDM
EFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTME
IREGRGVGAHKDHIHLNLSHLPPETLAERLPGISESARIFAGVDVTKEPIPVLPTVHYNM
GGIPTNYWGEVLNPTIGNPDNVAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAI
RAKDVVDPATAVPTPPKAAIDKALGRFDGLRHAKGTVSTAELRLEMQRTMQADAAVFRTD
KTLSEGVEKMKAVAGKMDDIKVTDRSMIWNSDLMETLELTNLMPNALCTVVSAEARKESR
GAHAHEDYPDRDDANWRKHTLSWVEGAKVKLDYRPVHLDPLTTHEAGGIELKKIAPKARV
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttacgattttgagacgcacgactatgacgtggttgttgtaggggctggcggt
gccggtctgcgcgcgaccctcggcatggcagagcagggcctgcgaacggcctgcatcacg
aaggtgttcccgacccgctcccacaccgtggcagcgcagggcggcattgccgcgagcttg
ggcaatatgggccccgacagctggcagtggcacatgtatgacaccgtcaagggctccgac
tggctgggcgataccgacgcgatggaatacctcgcccgggaggcgccgaaggcggtctat
gagttggaacattacggcgttccgttctcgcgcaccgaagagggcaagatctatcagcgc
cccttcggtggccacaccaccgaattcggcgaaggcccgcccgtgcagcgcacctgtgcc
gccgcggaccggaccggccacgcgatcctgcacacgctttatggccaaagcctgaagcag
aaggcagagttcttcatcgaatacttcgccatcgatctgctgatgaccgaggatggcgaa
tgccagggggtcgtggcctggaaactggatgacggtacgatccacgtcttcgccgccaag
atggtcgtgctggcgactggtggctatgggcgcgcctatttctcggccacgtcggcccat
acctgcaccggcgacggtggcggcatggtggcccgtgcaggcctgccgctgcaagacatg
gagttcgtgcagttccacccgaccggtatctatggcgcgggctgcctgatcaccgagggc
gcgcgcggcgagggcgggtacctgacgaactccgaaggcgagcggttcatggaacgctat
gcgccgacctacaaggacctcgcctcgcgcgacgtggtcagccgctgcatgaccatggaa
atccgcgaaggccgcggcgtgggggcgcacaaagaccacatccacctcaacctcagccat
ctgccgccggaaacgctggccgaacgcctgcccggtatctcggaatcggcgcggatcttc
gctggcgtcgacgtcaccaaggaaccgatcccggtgctgccgaccgtccactacaacatg
ggtggcatccccacgaactattggggcgaggtgctgaacccgacgatcgggaaccccgac
aacgtggccccgggcctgatggccgtgggcgaggcgggctgtgccagcgtgcacggcgcc
aaccggcttggctccaactcgctgatcgaccttgtggtcttcgggcgcgcagccgcgatc
cgggcaaaggatgtagtcgatccggcgaccgctgtgccgacgccgcccaaggccgccatc
gacaaggcactgggtcggttcgacgggttgcgccatgcgaaaggcacggtttcgaccgcc
gagttgcgtcttgagatgcagagaacgatgcaggccgatgcggccgtcttccgcacggac
aagaccttgtccgagggcgtggaaaagatgaaggccgttgccggcaagatggacgacatc
aaggtcaccgaccggtcgatgatctggaactccgacctgatggagacgctggaactgacc
aacctgatgcccaatgcgctgtgcactgtggtctcggccgaagcgcggaaggaaagccgc
ggcgcccatgcgcacgaggactatcccgatcgcgacgacgccaactggcgcaagcacacg
ctgtcctgggtcgagggggccaaggtcaagctggactaccgcccggtgcatctcgacccg
ctgaccacgcacgaggccggcggcatcgagctgaagaagatcgcgcccaaggcgcgggtg
tattga
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