Rhodovulum sp. P5: RGUI_0863
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Entry
RGUI_0863 CDS
T04813
Name
(GenBank) Dipeptide-binding ABC transporter, periplasmic substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGUI_0863
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhc02000
]
RGUI_0863
Transporters [BR:
rhc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RGUI_0863
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Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ARE39004
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All DBs
Position
complement(734734..736332)
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AA seq
532 aa
AA seq
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MSKHSNATRGWLLVGAAISALAGGMATAQEPKHGGTIIVHMPSEQRILNPALRASTGVYN
ITGKIMEPLIDKTYDGPVGVLATDWSTTEDGLHITVTLREGVTWHDGEAFTCEDVAFSAM
ELWKTKLNYSSTLQQYLESVDCTDDYTAVFNYSQPMPLNLFVAAMPDLGHPVPKHLYEGT
DIMKNKHNTAPVGTGPFKFVEYQRGQYVIAERNDTYWRGDGYPYLDRIVWRFIPDKSAAA
AAIEAGEIHESGFNGVSMADIERFSEMNGFDVGTKGYENNVAHSTVEFNHRNPILADLKV
RQAIYHGLDIDYAIDTIMRGFAKPGRGPIPSAGGVNYTDDVPTYPYDPELAKQMLDEAGY
PAGDDGIRFKLRHRPAPWGEYTQLWAEYFAQAMGEIGIDVEILTNDAPGFLNGVYRDHDF
DTANGWHQFRSDPAVSTMVWLRSGSPEGTPWSNQFGWQSDEMDQMIDAAQAELDPEKRAA
RYHEIQAKAMAEIPVIFAIEHPFISVTSQRLVNHHNTPRWNSSSWYDLWLDQ
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcacagcaacgcaacgcgcggatggcttctggtgggggcggccatttcggca
ctggccggtggcatggccacggcgcaggagccgaagcatggcgggaccatcatcgttcac
atgccgtccgagcagcggatcctgaaccccgcgcttcgggcctccaccggtgtgtacaac
atcaccggcaagatcatggagcccctgatcgacaagacctatgacgggccggtgggcgtg
ctggcgaccgactggtccacgaccgaggatggcctgcatatcaccgtcacgctgcgtgag
ggcgtgacctggcatgatggagaggcgttcacctgcgaagacgtcgcgttttcggcgatg
gagctttggaagaccaagctcaactattcctcgaccctgcaacaatacctggaatccgtt
gactgcacagacgattacacggcggtcttcaactattcgcagccgatgccgctgaacctg
ttcgtcgcggcgatgcccgatctcggccatccggtgcccaagcacctgtacgagggcacg
gatatcatgaagaacaagcacaacaccgcccccgtcgggacgggcccgttcaagttcgtg
gaataccagcgcggccagtatgtgatcgcggagcggaacgacacgtattggcggggcgat
ggctatccctatctcgaccggatcgtctggcgcttcattcccgacaagtcggccgccgcc
gccgcgatcgaggcgggcgagatccacgaatccggcttcaacggtgtctcgatggccgat
atcgagcggttctcggagatgaacggtttcgatgtcggcaccaaggggtatgagaacaac
gttgcccactccaccgtcgagttcaatcaccgcaacccgatcctcgccgatctgaaggtg
cggcaggcgatctatcacgggctggatatcgactatgcgatcgacacgatcatgcgcggc
tttgccaagccgggccgcggcccgatcccgtctgcgggtggcgtgaactataccgacgat
gtgccgacctatccctatgatccggaactggccaagcagatgctggacgaggcgggctat
ccggcgggcgacgatggcatccggttcaagctgcgccaccgccccgcgccctggggcgaa
tacacccaactgtgggcggagtatttcgcgcaggcgatgggcgagatcggcatcgatgtc
gagatcctgacgaatgatgcgccgggcttcctgaacggggtctatcgcgaccacgacttc
gacaccgccaatggctggcaccagttccggtccgacccggcggtctcgacgatggtctgg
ctgcgctccggctcacccgaaggcacgccctggtcgaaccagttcggctggcagtccgac
gagatggaccagatgatcgatgccgcgcaggcggagcttgaccccgaaaagcgggccgcg
cgctatcacgagatccaggccaaggcgatggcagagatcccggtcattttcgcgatcgaa
catccctttatctcggtgacctcgcaaaggctggtgaaccaccacaatacgccacggtgg
aattcttccagctggtacgatctctggctcgaccagtga
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