Rhodovulum sp. P5: RGUI_1025
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Entry
RGUI_1025 CDS
T04813
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhc
Rhodovulum sp. P5
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_1025
Enzymes [BR:
rhc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RGUI_1025
DNA repair and recombination proteins [BR:
rhc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RGUI_1025
Prokaryotic type
RGUI_1025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ARE39166
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All DBs
Position
complement(899052..900473)
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AA seq
473 aa
AA seq
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MSGHAPVLWWVRRDLRLTDNPALQAACEAGSPVIPVFILDEVAETLGSAPKWRLGLGVEA
FGKTLSNRKSRLILRRGRALDVLRALIRETGAGAVVWTRVYDAPSIERDKAAKAALKDDG
VEARSVAGHLLFEPWTVETKTGDFYKVFTPFWKTVRGQAVPEPTPAPGHIPAPDNWPASD
DLSDMQMGAAMRRGAAVVAEHALAGEDAALGRLGAFVADRIADYKDLRDFPAAHGTSRLS
ENLTYGEVSPRTCWHAGRRAMEEGKQGAETFLKELVWREFGYHLLWHTPHIATGNWREGW
DRFPWNADATTPEVTAWKQGRTGIPFVDAAMRELYVTGTMHNRARMIVASYLTKNLMSHW
KIGLDWFADCLIDWDPASNAMGWQWAAGSGPDAAPYFRVFNPITQREKFDPQRAYVDAWI
AEGRRAPSKTALSYFDAIPKSWRLLPGDPYPDPVVTVEDGRKRALAAYEARDF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggcatgcccccgtcctctggtgggtcaggcgcgatctgcgtcttacggacaac
cccgcgcttcaggccgcctgcgaagcgggcagcccggtcattccggtcttcattctggat
gaggtggcagaaacgcttgggtccgcgccgaaatggcggttgggtctgggggtggaggca
tttggcaagaccctttccaaccgcaagtcgcgcctgatcctgcgccgggggcgtgcgctt
gacgtgttgcgcgcgctgatacgggaaacaggggccggtgccgttgtctggacccgcgtc
tatgacgcgccaagcatcgagcgcgacaaggccgcgaaggccgcgctgaaggacgacggg
gtggaggcacgctcggtcgccgggcacctgttgttcgaaccctggacggtggagacgaag
accggcgatttctacaaggtcttcacgcccttctggaaaacggtgcggggacaggccgtg
ccggagccgacgcccgcgccgggacacatcccagcgcctgacaactggcctgcctccgac
gatctttcggacatgcagatgggcgctgcgatgcgccgtggcgcggcagttgtcgccgaa
catgcgctggcgggggaagacgccgcgctgggccgtctgggcgccttcgttgccgaccgg
atcgccgactacaaggacctgcgagattttcctgcggcgcacggcacgtcccgcctgtcg
gagaacctgacctatggagaggtctccccgcgcacctgttggcatgcgggccgtcgcgcg
atggaagaaggcaagcaaggggcggagaccttcctgaaggaactggtctggcgcgaattc
ggctatcacctgctgtggcacacgccccatatcgcgaccggcaactggcgagagggctgg
gatcgcttcccgtggaacgcggacgccaccacgccagaggtcaccgcgtggaagcagggc
cgcaccggcatccccttcgtcgatgccgccatgcgggagctttacgtgaccggcaccatg
cacaaccgcgcccggatgatcgtggcctcttacctgaccaagaacctgatgagccactgg
aagatcgggcttgactggtttgccgactgcctgatcgactgggacccggcgtcgaacgcg
atgggctggcaatgggcggcggggtcgggtccggatgccgcgccctatttccgggtgttc
aacccgatcacccagcgggagaaattcgacccgcagcgcgcctatgttgatgcctggatc
gcggaagggcggcgggcaccgtcaaagacggcgctgtcctatttcgacgcgatcccgaaa
tcttggcggctgttgcccggcgacccttatcccgatccggtcgtgacggtggaagacggg
cgcaaacgggcgcttgcggcgtacgaggcgcgcgatttctag
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