Rhodovulum sp. P5: RGUI_1073
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Entry
RGUI_1073 CDS
T04813
Name
(GenBank) Very-short-patch mismatch repair endonuclease (G-T specific)
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhc
Rhodovulum sp. P5
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_1073
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RGUI_1073
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
POLR1D
Motif
Other DBs
NCBI-ProteinID:
ARE39214
LinkDB
All DBs
Position
949464..949841
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AA seq
125 aa
AA seq
DB search
MRSALHRAGYRFRLKAPLPGKPDLTLKKFRATIFTHGCFWHMHDCPRFKQPGGDNAEFWR
AKLIRNAERDREVAEQLSALGWRQLVVWECALIGPGRLDLPTVVDRIGQWLTSGAETGEI
AGEFE
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttccgcgctgcatcgcgccgggtatcggtttcgtctgaaagcgcctctgccgggc
aagcccgacctgacgttgaagaaattccgggctacgatattcacgcacgggtgtttctgg
cacatgcacgactgtccccggttcaaacaacccggcggggacaacgccgaattctggcgg
gccaagctgatccgcaatgcggagcgcgaccgggaggttgcggaacagctttcagcgctg
ggctggcggcagttggtggtatgggaatgcgcgctgatcgggccggggcggcttgatctg
cccacggttgtggacagaatagggcagtggctaacgtccggtgcagaaacgggcgagata
gccggagaattcgagtga
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