Rhodovulum sp. P5: RGUI_1359
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Entry
RGUI_1359 CDS
T04813
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RGUI_1359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhc03021
]
RGUI_1359
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_1359
Enzymes [BR:
rhc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RGUI_1359
Transcription machinery [BR:
rhc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RGUI_1359
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RGUI_1359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
ARE39500
UniProt:
A0A1V0PTQ2
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All DBs
Position
complement(1249585..1250601)
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AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPTQLDIKPGNDPARQATVIAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVALRMEVEGPKRLSVSAKGPGVVTAGDISE
TAGIEVLNRDHVICHLDDGADLFMELTVNTGKGYVAADKNRPEDSPIGLIPIDAIYSPIK
KVAYDVQPTREGQVLDYDKLTMKVETDGSLTPDDAVAFAARILQDQLSIFVNFEEPESAG
REAEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEEWPPENIEDLAKKFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactggcaggaactgatcaagcccacgcagcttgatatcaagccgggc
aacgatcccgcgcgtcaggccaccgtcattgccgagccgcttgaacggggattcggcctg
accctcggcaatgcgctgcgtcgggttttgatgagctcgcttcagggggcggcgatcacc
tctgtccagatcgacaacgtcctgcatgaattctcctcggttgccggggtgcgcgaagac
gtcaccgatatcgtgctcaacctcaagggcgtcgcattgcggatggaggtcgaggggccg
aaacggttgtcggtctcggccaaggggccgggcgttgtgaccgccggcgatatctccgaa
accgccgggatcgaggttctgaaccgcgaccacgtgatctgccatctcgacgacggggcc
gacctgttcatggaactgaccgtgaatacgggcaaaggctatgtcgccgcggacaagaac
cgccccgaggattcgcccatcggcctcatcccgatcgacgcgatctactcgccgatcaag
aaggttgcctatgacgtgcagccgacgcgggaaggccaggtgctcgactacgacaaactg
acgatgaaggtcgaaaccgacgggtcgctgacacctgacgatgcggtcgccttcgcggcc
cgtatcctgcaggatcagttgtcgatcttcgtcaacttcgaggaaccggaatcggccggc
cgcgaggcagaggatgacgggctggaattcaacccgctgctgctgaagaaggtggacgag
ctggagctttccgtccggtcggccaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaagaccgaggcggagatgctgcgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctgtccggcatggggctgcatctcggcatggatgtcgag
gaatggccgccggagaacatcgaggatctggccaagaagttcgaggaccagttctag
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