Rhodovulum sp. P5: RGUI_1397
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Entry
RGUI_1397 CDS
T04813
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGUI_1397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhc03019
]
RGUI_1397
03110 Chaperones and folding catalysts [BR:
rhc03110
]
RGUI_1397
03029 Mitochondrial biogenesis [BR:
rhc03029
]
RGUI_1397
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhc04147
]
RGUI_1397
Enzymes [BR:
rhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RGUI_1397
Messenger RNA biogenesis [BR:
rhc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RGUI_1397
Chaperones and folding catalysts [BR:
rhc03110
]
Heat shock proteins
HSP60 / Chaperonin
RGUI_1397
Mitochondrial biogenesis [BR:
rhc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RGUI_1397
Exosome [BR:
rhc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RGUI_1397
Exosomal proteins of other body fluids (saliva and urine)
RGUI_1397
Exosomal proteins of breast cancer cells
RGUI_1397
Exosomal proteins of colorectal cancer cells
RGUI_1397
Exosomal proteins of bladder cancer cells
RGUI_1397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ARE39538
LinkDB
All DBs
Position
complement(1278068..1279711)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFESDARNRMLAGVNILADAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGI
DLATAKVVEAIKAAARPVENSDEVAQVGTISANGEAAIGRQIADAMQKVGNDGVITVEEN
KGMETEVEVVEGMQFDRGYLSPYFVTNPDKMVAELEDCLILLHEKKLSSLQPMVPLLEAV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLENVTMDMLGSAKKVSITKDETTVIDGAGEKAEIEARVSQIRQNIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVIVGGGVALV
QGAKALDGLEGDNEDQNAGIAMLRRALEAPLRQIAENAGVDGAVVAGKVRESDNQHFGFN
AQTEEYGDMFSFGVIDPAKVTRTALEDAASVAGLLITTEAMVADKPEPKGAGAGGGMPDM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgtcaagttcgaatccgatgcccgcaaccgcatgctggccggcgtc
aacatcctcgccgatgccgtaaaggtcaccctcggcccgaaaggccgcaacgtggtcatc
gaaaagtcgttcggtgccccgcgcatcaccaaggacggcgtgaccgttgccaaggaaatc
gaactggaagacaagttcgagaacatgggcgctcagatggtgaaggaagtcgcttcccgc
accaatgacgaggccggcgacggcaccaccaccgccaccgtgctggcccaggccatcgtc
aaggaaggcatgaagtcggttgccgccggcatgaacccgatggacctcaagcgcggcatc
gatctggccaccgcgaaggtcgtcgaggcgatcaaggccgcggcccgtccggtcgagaac
tccgacgaggttgcgcaggtcggcacgatctctgccaacggcgaggccgccatcggccgt
cagatcgccgacgcgatgcagaaggtcggcaatgacggcgtgatcaccgtcgaagaaaac
aagggcatggagacggaagtcgaagtcgtcgaaggcatgcagttcgaccgtggctacctg
tcgccctacttcgtgaccaaccccgacaagatggtcgccgagctggaagactgcctgatc
ctgctgcacgagaagaaactctcgtcgctgcagccgatggttccgctgctggaagccgtg
atccagtcgcagaagccgcttctgatcatcgctgaagacgtcgaaggcgaagcgctggcg
accctcgtggtcaacaagctgcgcggtggcctgaaaatcgccgccgtcaaggcaccgggc
ttcggcgaccgccgcaaggccatgctgcaggacatcgcgatcctgaccggcggccaggtg
atctccgaagacctcggcatgaagctggaaaacgtcacgatggacatgctgggttcggcc
aagaaagtgtcgatcaccaaggatgagaccaccgtcatcgacggcgccggtgagaaggcc
gagatcgaggcccgcgtcagccagatccgtcagaacatcgaggaaaccacctcggactac
gatcgcgagaagctgcaggaacgtgtcgcgaaactggccggtggcgttgccgtcatccgc
gtcggcggcatgaccgaagtggaagtgaaagagcgcaaggaccgcgttgacgacgcactg
aacgcgacccgcgcggccgttcaggaaggcgtgatcgtgggcggcggtgttgccctcgtt
cagggtgcgaaagcgctcgacggcctggaaggcgacaacgaagaccagaacgccggcatc
gcgatgctgcgccgcgcgctggaagccccgctgcgccagatcgccgaaaacgccggtgtc
gacggtgccgtcgtggccggcaaggttcgcgaaagcgacaaccagcacttcggcttcaac
gcgcagaccgaggaatatggcgacatgttctccttcggcgtgatcgacccggccaaggtg
acccggaccgcgctggaagatgcggcctcggttgctggcctcttgatcaccaccgaagcc
atggtggccgacaagcccgagccgaaaggcgccggtgccggcggcggcatgcccgacatg
ggcggcatgggcggcatgatgtaa
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integrated database retrieval system
