Rhodovulum sp. P5: RGUI_1607
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Entry
RGUI_1607 CDS
T04813
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc03030
DNA replication
rhc03430
Mismatch repair
rhc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGUI_1607
03430 Mismatch repair
RGUI_1607
03440 Homologous recombination
RGUI_1607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhc03032
]
RGUI_1607
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_1607
Enzymes [BR:
rhc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGUI_1607
DNA replication proteins [BR:
rhc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGUI_1607
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGUI_1607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
ARE39748
UniProt:
A0A1V0PV30
LinkDB
All DBs
Position
complement(1493182..1496415)
Genome browser
AA seq
1077 aa
AA seq
DB search
MLLAQNEAGYGNLMKLNSCLYVDKHGALPQVTLEELDRHSDGLICLTGGPDGPVGRLLQA
GQRPKAEALMARLAASFPTRLYVELQRHPGEGGQPTEAEAATERGHVEMAYAMDLPLVAT
NDVYFPKTEMYEAHDALICIAEGAYVDQADPRRRLTPQHYFKTPEEMAALFADLPEALDN
TIEIARRCAFKADRRKPILPRFAEDEVEELRRQAKEGLVARLAVIPHAAPVEDYEKRLDF
ELGIIESMGFPGYFLIVADFIKWAKEHDIPVGPGRGSGAGSLVAYALTITDLDPLRYSLL
FERFLNPERVSMPDFDIDFCMDRREEVIEYVQRKYGREKVAQIITFGALLSKAAVRDVGR
VLQMPYGQVDKLSKLIPVEGVKPVSITKALEEEPRLREAARSEEVVDRLLTYGQQVEGLL
RNASTHAAGVVIGDRPLDELVPLYQDPRSDMPATQFNMKWVEQAGLVKFDFLGLKTLTVI
QNAIDLILGGGRNLHEAADGTRIYDPAEGAENEIGHIPLDDEATYELYASAKTVAVFQVE
SSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPTYCEVKNGLKARASVHPLIDHILEE
TQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIKEAMDAERPKFEKGAAENGVDAK
KASEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANHPVEFMAGVMNCDLHLTEKLAV
YAEEVRRGLKIEIVPPCVNRSGAMFGVAEGRLVYALGALKNVGVEAMKLIVQGRGDKPFA
TLFDFARRVDMKQIGKRPLEMLARAGAFDELDPNRRRVFDSLDALVAYSAAIHDQRGSAQ
VSLFGEAGADLPEPRLSPVVDWLPNERLAEEQKAVGFYLSGHPLDDYMAALKRKKVMTKT
EVEEAAKSNAIVARMAGAVAGRQERKSAKGNRFAFAQLSDPTGLFEVTLFSDVLEAARDH
LEAGMNVVLQVEATMENDQLKLLARSVQPVDTVVADAGAAGLKIFVEDPSAVAAVSGLLD
RAKGETGLRGRGPVQLCLMAPDLPGEVEMGLGESYPVTPQIKGALKSLPGVLTVEDF
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctggcgcagaacgaggccggctatggcaacctgatgaagctgaactcatgcctc
tacgtggacaagcacggagccttgccacaggtcacgctggaggaactggaccggcacagt
gacggcctgatctgtctgaccggcgggccggatggccccgtggggcgcctattgcaggcc
ggtcagcgccccaaggccgaggccctgatggcgcggcttgcggcgtcctttccgacacgg
ctttatgtcgagttgcagcgccatcccggagagggcgggcagccgaccgaggcggaagcg
gccaccgagcgcggccatgtggagatggcctatgcgatggacctgcctctggtggccacc
aacgatgtctatttcccgaagaccgagatgtacgaggcgcatgatgccctgatctgcatc
gccgaaggggcctatgtcgatcaggccgacccgcgccgccgcctgacgccgcagcactat
ttcaagacgcccgaggaaatggcggcgctctttgccgacctgccagaggcgctggacaac
accatcgagatcgcgcgccgctgtgcgttcaaggcggacaggcgcaagccgatcctgccg
cgctttgccgaagacgaggtggaggaattgcggcggcaggcgaaggaggggctggtcgcg
cgtctggctgtgatcccccatgccgcgccggtcgaggactatgagaaacggctcgacttc
gaactcggcatcatcgagtcgatgggattcccgggctacttcctgatcgttgccgacttc
atcaaatgggccaaggagcatgacatcccggtggggccgggccgtggctcgggggcgggc
agtcttgtggcctatgcgctgacgatcaccgaccttgacccgctgcgctattcgctgctg
ttcgaacggttcctgaaccccgaacgggtcagcatgcccgacttcgacatcgatttctgc
atggatcgccgggaggaggtgatcgaatacgtccagcgcaagtatggacgggaaaaggtc
gcgcagatcatcaccttcggcgcgcttctgtccaaggccgcggtgcgcgatgtggggcgc
gtcttgcagatgccctatggacaggtcgacaagctgtcgaagctgatcccggtcgagggc
gtcaagccggtgtccatcaccaaggcgctggaggaagagccgcgcctgcgcgaggccgcc
cgcagcgaagaggtcgtggaccggttgctgacctatgggcagcaggtcgagggcctgctg
aggaatgcctccacgcatgccgcgggcgtggtgatcggcgaccgcccgctggacgaactc
gtcccgctttatcaggatccgcggtcggacatgccggccacgcagttcaacatgaaatgg
gtcgaacaggcgggtcttgtcaaattcgacttcctcggtctgaaaacgctgacggtgatc
cagaacgccatcgacctgatccttggcggcgggcgcaacctgcacgaagcggcggacggc
acccggatctacgaccccgccgaaggcgcggaaaacgagatcgggcatatcccgctggat
gacgaggcgacctacgagctgtacgccagcgcgaaaacggtcgccgtgttccaggttgaa
agttcgggcatgatggacgcgctgcgccggatgaagcccacctgcatcgaggatatcgtg
gcgctggtggccctttaccgccccggcccgatggaaaacatcccgacctattgcgaggtg
aagaacgggctgaaggcgcgcgcctcggtccatccgctgatcgaccatatcctggaggaa
acccagggcatcatcgtctaccaggaacaggtgatgcagatcgcacaggtcatggcgggc
tacagccttggcggcgctgacctgctgcgccgcgccatgggcaagaagatcaaggaggcg
atggacgccgagcggcccaaattcgaaaagggggccgcggaaaacggcgtcgatgccaag
aaggcgagcgaggtgttcgaccttctggagaaattcgccaattacgggttcaacaaatcc
cacgccgcggcctatgccgtggtcagctatcagaccgcatggctcaaggccaaccacccg
gtggagttcatggccggcgtgatgaactgcgatctccacctgaccgagaaactcgccgtc
tatgccgaggaagtccgccggggcctgaagatcgagatcgtgccaccttgcgtgaaccgc
tctggcgcgatgttcggcgtggccgaaggccgactggtctatgcgctgggcgcgctgaaa
aacgtgggcgtggaggcaatgaagctgatcgttcaggggcgcggtgacaaaccctttgcg
acgcttttcgattttgcccgccgggtcgacatgaagcagatcggcaagcgcccgctggaa
atgctggcccgtgccggggcgttcgacgaactcgaccccaatcgccgccgggtgtttgac
agtctcgatgccctcgtggcctattccgccgcgatccatgaccagcgcgggtccgcgcag
gtgtcgttgttcggcgaggccggcgccgacctgccggagccgcggctttccccggtcgtg
gactggctgcccaacgaacggctggccgaagagcagaaggcggtcggcttctacctctcg
ggccatccgcttgacgactacatggccgcgttgaaacgcaagaaggtcatgaccaagacc
gaggtggaggaagcggccaaatccaatgccatcgtcgcgcgcatggcgggggcggtcgcc
ggccggcaggagcggaagtcggccaagggcaaccgctttgccttcgcgcaactgtccgac
ccgacggggctgttcgaggtgacgctgttctccgacgtgctggaggctgcccgcgaccat
ctggaggccgggatgaacgtcgtcctgcaagtggaagcgacgatggagaacgaccagttg
aaactcttggcccgttcggttcagccggtcgatacggtcgtggccgatgccggggctgcg
gggctgaagatctttgtcgaggatccctcggccgtagccgccgtctcgggcctgctcgac
cgggcgaagggggaaacggggctgcgcgggcgtggcccggtgcagctctgcctgatggcc
cccgacctgccgggcgaggtcgagatggggctgggggaaagctacccggtgaccccgcag
atcaagggcgcgctgaaatccctgcccggtgttctgacggtggaggatttctga
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