Rhodovulum sp. P5: RGUI_1915
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Entry
RGUI_1915 CDS
T04813
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc03420
Nucleotide excision repair
rhc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RGUI_1915
03430 Mismatch repair
RGUI_1915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_1915
Enzymes [BR:
rhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGUI_1915
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RGUI_1915
MMR (mismatch excision repair)
Other MMR factors
RGUI_1915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
DUF7595
DEAD
Motif
Other DBs
NCBI-ProteinID:
ARE40056
LinkDB
All DBs
Position
complement(1809523..1811886)
Genome browser
AA seq
787 aa
AA seq
DB search
MSPIDDAEAFEADDPVPLSARAMAARPAPYLDDLNAAQRAAVETLEGPVLMLAGAGTGKT
KALMARIAHLIMQGRARPNEILAVTFTNKAAREMKERLSKTPFHLYEPLKWMGTFHAICV
KLLRRHAELAGLKSNFTILDTDDQIRLMKQLIVAANIDEKRWPARQLAGIIDRWKNRAWV
PDAVPVAEASAFNSRGVELYAEYQARLKTLNAVDFGDLLLHMVTIFQAQPDVLAQYRRWF
RYILVDEYQDTNVAQYLWLRLLAGGHHNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGA
QVIRLEQNYRSTPHILAAASGLIAANKGRLGKTLWTEAEGGEKVRLIGHWDGEEEARWIG
EEAEAMQGGSRGLRPYSLDEMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIR
DAMAYFRLAVSPDDDLAFERIVNTPKRGLGDKAQQKIQTMARANGVPLVEGARLLLETKG
ITGKGAKELAALLQGIGRWHGAALDATESHIELAERILDDSGYTAHWQNDKTPEAPGRLE
NLKELVKALEGFDNLQGFLEHVALIMDNESEDHGAKISVMTLHAAKGLEFPVVFLPGWED
GLFPSQRAMDENGLTALEEERRLAYVGLTRAEEVCTVSFAANRRVYGQWQSALPSRFIDE
LPSAHVDVLTPPGLYGGGYGAAAPAQSTVEEAAARADVYNSPGWRRLQSRSASRPVSQPR
ESRTVVIDAEAIAAFATGERVFHQKFGYGIVTGIEGDKLDIDFDTSGPKKVVARFVVAAG
NVDDVPF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgattgatgatgcagaggccttcgaggccgacgatcccgtcccgctttccgcc
cgagccatggccgcgcggcctgcgccctatcttgacgatctcaacgccgcccagcgggcc
gcggtcgagacgctggaagggccagtgctaatgctggcgggcgccggtacgggaaagacc
aaggcgcttatggctaggatcgctcatttgatcatgcaagggcgggcaaggccaaatgag
atcctcgcagtgaccttcaccaacaaggcggcgcgcgagatgaaggagcggctgtcaaag
acgcctttccatttgtatgagccactaaagtggatgggcaccttccacgcgatctgcgtg
aagcttttgcgccgccatgcggaactggcggggctgaagtcgaatttcacgattctagat
accgacgaccagatccggctgatgaaacagctgatcgtcgcggccaatatcgatgaaaag
cgctggcccgcgcggcagctggccgggatcatcgaccggtggaagaaccgcgcctgggtg
ccagatgccgtgccggtggccgaagcttcggccttcaacagccgcggggtggagctttac
gcggagtatcaggcccgcctgaaaacgctgaacgcggtcgatttcggtgatctgcttctg
cacatggtcacgatctttcaggcccagccggatgtgctggcgcaatatcgccgctggttc
cgctacatccttgtggacgaataccaggacaccaacgtcgcgcagtatctgtggctgcgg
cttctggcgggcggtcatcacaacatctgctgcgtgggcgacgacgaccagtcgatctat
ggctggcggggcgcagaggtcggcaacatcctgcggttcgagaaggactttcccggcgcg
caggtgatccggctggagcagaactaccgctccacaccccatattcttgcggcggccagc
ggcctgatcgcagccaacaagggccggttgggcaagacactctggaccgaggccgagggg
ggcgagaaggtccgcctgatcggtcattgggatggggaggaagaggcccgctggatcggc
gaagaggccgaggcgatgcagggcggctcccgtgggctgcgcccctattcgctggacgag
atggcgatcctcgtccgtgcgtcgcaccagatgcgggcgttcgaagaccggttcctgacc
atcggcctgccctatcgcgtgatcggcgggccccggttctatgagcggatggagatccgc
gacgcgatggcctatttccgcctcgccgtcagccccgatgacgatctggcattcgagcgg
atcgtgaatacgcccaagcgcggccttggcgacaaggcgcagcagaagatccagaccatg
gcgcgggccaatggcgtgccgctggtggagggcgcgcggctgctgctggaaaccaagggg
atcacgggcaagggcgcgaaggaactggcggcgctgttgcaggggatcgggcgctggcat
ggtgcggcgctggacgccaccgaaagccatatcgaactggccgagcgtatcctcgacgac
tccggctataccgcccattggcagaacgacaagacgccagaggcaccggggcggctggaa
aacctcaaggaactggtcaaggcgctggaggggttcgacaacctgcaagggttcctcgaa
catgtggcgctgatcatggacaatgaatccgaagaccacggcgcgaagatctcggtcatg
acgctgcacgccgccaaggggctggagtttcccgtcgtgttcctgccgggctgggaggat
gggctgtttcccagccagcgtgcgatggacgaaaacgggctgaccgcgctagaggaagag
cgccgccttgcctatgtcggcctgacccgggccgaggaggtctgcacggtgtcctttgcc
gcgaaccgccgggtctatggccagtggcagtcggcgctgccctcgcggttcatcgatgaa
ctgccgtctgcgcatgtggatgtgctcacccccccgggcctttacgggggcggctacggc
gccgccgcgccggcgcaatcgacggtggaggaggccgcggcgcgggccgatgtctacaat
tcgccgggctggcggcggctgcaaagccgaagcgcgtcgcggcccgtctcccaaccgcgc
gaaagccgtacggtcgtcatcgacgcggaggctattgccgccttcgccacgggggagcgc
gtgttccaccagaaattcggctatggcatcgtcacggggatcgagggggacaagctggac
atcgactttgacacgtcagggccgaagaaggtggtcgcccgctttgtggtcgccgcgggt
aacgtcgacgacgtgccgttctga
DBGET
integrated database retrieval system
