Rhodovulum sp. P5: RGUI_1964
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Entry
RGUI_1964 CDS
T04813
Name
(GenBank) Octaprenyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc00900
Terpenoid backbone biosynthesis
rhc01100
Metabolic pathways
rhc01110
Biosynthesis of secondary metabolites
Module
rhc_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RGUI_1964
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rhc01006
]
RGUI_1964
Enzymes [BR:
rhc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RGUI_1964
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RGUI_1964
2.5.1.29 geranylgeranyl diphosphate synthase
RGUI_1964
Prenyltransferases [BR:
rhc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RGUI_1964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ARE40105
LinkDB
All DBs
Position
complement(1867100..1867969)
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AA seq
289 aa
AA seq
DB search
MDISARVEAAITRAIAEGQAGTPPAKLASALEYALTPGGARIRPTICLNVALACGDDKPE
LADAAAASVELIHCASLVHDDMPCFDDADIRRGKPALHKAYGEPLALLTGDSLIVAGFEV
IARAAHHDCERAMEMIRIIGKRTGMPYGICAGQGWESEEEINLSAYHKAKTGALFIAATQ
MGAVAAGQDAELWEELGDRIGEAFQVADDLKDALLDADEMGKPAGQDEANSRPSAVTELG
VEGAVQRFQDILSGAIASIPSCPGEAQLAQLVQKMAERLVPAKAFQAAE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacatctcggcgcgcgtggaagcggcgatcacccgggcgattgcagaggggcaggca
ggcacgcccccggcaaaactggcctcggccctcgaatatgcgttgacgcccgggggcgca
cgcatccggcccacgatctgcctgaacgtggcgctggcctgcggcgacgacaagccggaa
ctggcggatgcggcggcggcctcggtcgagctgatccactgtgccagcctcgtccatgac
gacatgccatgtttcgacgatgccgatattcgccgtggcaagcccgcgctgcacaaggct
tacggcgaaccgctggcgcttttgaccggggacagcctgatcgtcgccgggttcgaggtg
atcgcgcgggccgcgcaccatgattgtgagcgcgcgatggagatgatccgcatcatcggc
aagcgcaccggcatgccctatggcatctgcgcggggcaaggctgggagagcgaggaagag
atcaatctttccgcctatcacaaggccaagaccggggcgctgttcatcgccgcgacccag
atgggcgcggtggccgcggggcaggatgccgagctttgggaagaactgggcgaccgcatt
ggcgaggcgttccaggtggccgacgacctgaaggacgcgctgctggatgccgacgagatg
ggcaagcccgccggtcaggacgaggccaacagccgccccagcgcggtcaccgaactgggg
gtcgagggcgcggttcagcggtttcaggatatcctgtcgggggctattgcctccatcccc
tcctgtccgggcgaggcgcagcttgcgcaactggtgcagaagatggccgagcggctggtg
ccggccaaggcgtttcaggccgcagagtaa
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