Rhodovulum sp. P5: RGUI_2041
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Entry
RGUI_2041 CDS
T04813
Name
(GenBank) Ribulose bisphosphate carboxylase large chain
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc00630
Glyoxylate and dicarboxylate metabolism
rhc00710
Carbon fixation by Calvin cycle
rhc01100
Metabolic pathways
rhc01110
Biosynthesis of secondary metabolites
rhc01120
Microbial metabolism in diverse environments
rhc01200
Carbon metabolism
Module
rhc_M00165
Reductive pentose phosphate cycle (Calvin cycle)
rhc_M00612
Anoxygenic photosynthesis in purple bacteria
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RGUI_2041
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RGUI_2041
Enzymes [BR:
rhc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
RGUI_2041
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Gene cluster
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Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ARE40182
UniProt:
A0A1V0PVL9
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Position
1944134..1945555
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AA seq
473 aa
AA seq
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MSAKKYDAGVKEYRSTYWEPEYSIKESDVLAVFKVIPQPGVSREEAAAAVAAESSTGTWT
TVWTDLLTDLDYYKGRAYAIEDVPGSDDAFYAFIAYPMDLFEEGSVVNVFTSIVGNVFGF
KAVRSLRLEDVRFPLWFVTSCFGPPHGINVERDKMDKYGRPLLGCTIKPKLGLSAKNYGR
AVYEVLRGGLDFSKDDENVNSQPFMRWRDRFLFCQEAIEKSEAETGERKGHYMNVTAPTM
EEVYKRAEFAKEIGTPIIMSDYLTLGWAAHNSLSKWCRDNGLLLHVHRAMHAVMDRNPNH
GINFRVLAKLLRLLGGDHLHSGTVVGKLEGDRAATLGWIDLLRDRYVKEDRDRGIFFDQD
WGAMPGVFPVASGGIHVWHMPALVSIFGNDSVLQFGGGTLGHPWGNAAGAAANRVALEAC
VQARNEGRELEKEGKEILTAAAQHSPELKIAMETWKEIKFEFDTVDKLDTQHR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaagaaatatgatgccggtgtgaaggaataccggtccacctactgggaaccc
gaatactccatcaaggagagcgacgttctagccgtgttcaaggtgatcccgcagccgggc
gtgtcgcgcgaagaagccgctgccgccgtggccgccgaaagctccaccgggacgtggacg
acggtgtggaccgaccttctgaccgatctggactactacaagggccgggcctacgcgatc
gaggacgtgccggggtctgacgatgccttctacgccttcatcgcctacccgatggacctg
ttcgaggaaggctcggtcgtcaacgtcttcacctcgatcgttggcaacgtgttcggcttc
aaggccgtccgctcgctgcgtctggaagatgtccgcttcccgctgtggttcgtgacctcg
tgctttggcccgccgcacggcatcaatgtcgaacgcgacaagatggacaagtacggccgt
ccgcttttgggctgcaccatcaagccgaagctgggcctgtcggcaaagaactacggccgg
gcagtgtacgaggtgctgcgcggcggtctcgacttctcgaaagacgacgagaacgtcaac
tcgcagcccttcatgcgctggcgcgaccgcttcctgttctgccaggaggccatcgagaaa
tccgaggccgaaactggcgagcgcaagggtcactacatgaacgtgaccgcgcccaccatg
gaagaggtctacaagcgcgccgaattcgcgaaagagatcggcaccccgatcatcatgtcg
gactacctgacgctgggctgggcggcgcataactcgctgtcgaaatggtgccgcgacaat
ggcctgctgctgcacgttcaccgcgccatgcacgccgtgatggaccgcaaccccaaccac
ggcatcaacttccgcgttctggcgaaactgctgcgcctgctgggcggcgaccacctgcat
tcgggcacggttgtcggcaagctggaaggcgaccgcgccgcgacgctgggctggatcgac
ctgctgcgcgaccgctatgtcaaggaagaccgcgaccgcgggatcttcttcgaccaggac
tggggcgcgatgccgggcgtcttcccggtggcctcgggcggcatccatgtctggcacatg
ccggcgctggtctcgatcttcggcaacgactcggtgctgcaattcggcggcggtacgctg
ggccacccgtggggcaacgcggcgggcgccgctgccaaccgtgtggcgctggaggcctgc
gtgcaggcccgcaacgagggccgcgaactggaaaaggaaggcaaggaaatcctcaccgct
gccgcccagcactcccccgaactcaagatcgccatggagacctggaaagagatcaagttc
gagttcgacaccgtggacaagctggacacccagcaccgctaa
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