Rhodovulum sp. P5: RGUI_2235
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Entry
RGUI_2235 CDS
T04813
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rhc
Rhodovulum sp. P5
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhc03032
]
RGUI_2235
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_2235
Enzymes [BR:
rhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RGUI_2235
DNA replication proteins [BR:
rhc03032
]
Prokaryotic type
DNA Topoisomerases
RGUI_2235
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGUI_2235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ARE40376
LinkDB
All DBs
Position
complement(2120869..2123286)
Genome browser
AA seq
805 aa
AA seq
DB search
MAENAARTDDYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADAVTVTIHPDSSVSVSDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSDWLELRIWRDGKEHFARFEHGETSEHLAVVGDAGDRTGTEVRFLASL
ATFSNLDYSFKTLENRLRELAFLNSGVQISLQDLRGAEPQKVEMHYEGGVREFVRYLDRH
KTALMPDPIFMEGERDGIGVEVAMWWNDSYHETVLPFTNNIPQRDGGTHLAGFRGALTRT
INGYATSSGLAKREKVSFSGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVESL
VNEKLAEWFEEHPQEARQIVGKIVEAALAREAARKARELTRRKTAMDVASLPGKLADCQE
KDPGHSELFLVEGDSAGGSAKQGRARANQAVLPLRGKILNVERARFDRMLSSQEIGTLIT
ALGTGIGRDEFDISKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPEIIEGGFLYIAQP
PLYKVSRGKSEVYLKDQGALEDYLIEMGIEGAVLRLGSGEEIVGADLARVVEEARHVRRI
LQAFPTHYPSHILEQAAIAGAFLPGQVDADLQGTADRVAARLDLIAAEYERGWQGRPTQD
KGMRFTRILRGVEEVRVLDGPVLRSPEAGRLGSLTDKLRDVYGTPATLLRKDRDQTINAP
SELLAAILGEGEKGLSLQRYKGLGEMNPDQLWETTLDPEARTLLQVRVADVAEADDIFTK
LMGDVVEPRREFIQQNALSVANLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacgcagcccggaccgacgactacggcgcagattccatcaaggttctcaag
gggttggaggcggtgcgcaagcgccccggcatgtatatcggggacaccgacgacggctcg
ggcctgcaccacatggtgtacgaggtcgtagataacggcatcgacgaggcgctggccggc
catgcggatgccgtgaccgtcacgatccaccccgattccagcgtgtcggtcagcgacaac
ggccgcggcattcctgtgggcatccacgaggaggagggcgtcagcgcggccgaggtcatc
atgacccagctgcatgcgggcgggaaattcgaccagaactcctacaaggtgtcgggcggt
ctgcatggcgtgggcgtcagcgttgtgaacgcgctttcggattggctggagttgcgcatc
tggcgcgacggcaaggagcatttcgcccgcttcgagcatggggaaacgtcggagcatctg
gcggtcgtgggggacgccggcgaccgaaccggtaccgaggtgcggttcctcgcctccctc
gcgacgttttccaacctcgattacagtttcaagacgctggaaaaccggctccgcgaactg
gccttcctgaattccggcgtgcagatttcgctgcaggacctgcggggggcagagccccag
aaggtcgagatgcattacgagggcggggtgcgggaattcgtgcgatacctcgaccggcac
aagaccgcccttatgcccgatccgattttcatggagggggagcgcgacggcatcggcgtc
gaggtcgcgatgtggtggaacgacagctatcatgaaaccgtcctgcccttcaccaacaac
atcccgcagcgggacggcggcacccatctggcgggttttcgtggtgcgctgacccgcacg
atcaacggctacgcgacttccagcgggttggcgaagcgggagaaggtcagctttagcggc
gacgatgcgcgcgaggggctgacctgtgtgttgtcggtcaaggtgcccgatccgaagttc
agcagccagaccaaggacaagctggtcagttccgaggtgcggcccgccgtcgaaagcctc
gtgaacgagaaactcgccgagtggttcgaggaacatccccaagaggcgcgccagatcgtc
ggcaagattgtcgaggcggcgctggcacgcgaagcggcgcgcaaggcccgcgaactgacc
cggcggaaaacggcgatggacgtggccagcctgcccggcaagctggccgattgtcaggaa
aaggaccccggccattcggaactgttcctggtggagggcgacagcgccggcggttcggcc
aagcaggggcgggcccgggccaatcaggcggtgctgccgcttcggggcaagatcctgaac
gtggaacgggcccgctttgaccggatgctcagcagtcaggagatcgggacgctgatcacg
gcgcttggcaccgggatcgggcgggatgaattcgacatttcgaagctgcgctatcacaag
atcatcatcatgaccgatgcggatgtggacggcgcccatatccgcacgctgctgttgacg
ttcttcttccggcagatgcccgagatcatcgaaggggggttcctctacatcgcgcagccg
ccgctttacaaggtcagccgcggcaagtccgaggtctacctgaaggaccagggcgcgctt
gaggactacctgatcgagatggggatcgagggcgccgttctgcgccttggctcgggcgag
gagatcgtgggcgccgaccttgcccgcgtggtggaagaggcgcggcatgtgcgccgcatc
cttcaggccttcccgacccactacccgtcccacatccttgaacaggccgcgattgcgggg
gccttcttgcccgggcaggtcgatgccgatctgcagggcacggccgaccgggtggccgcc
cggctggacctgattgccgcggaatacgaacggggctggcagggccgcccgacgcaggac
aaggggatgcggtttacccgtatcctgcgcggcgtcgaagaggtgcgcgtgctggacggc
cccgtcctgcgctcgcccgaggccggacggcttggcagcctgaccgacaagttgcgcgat
gtgtatggcacgcccgccacgctgctgcgcaaggatcgggaccagacgatcaatgcgccc
tcggaactactggcggcgatccttggcgagggcgagaagggcctcagcctgcagcgctac
aagggtttgggtgaaatgaaccccgaccagctatgggaaaccaccctcgaccccgaggcg
cggaccttgctgcaggtacgcgtggccgatgtggccgaggccgacgacatcttcaccaag
ctgatgggcgatgtggtcgaaccccggcgcgaattcatccagcagaatgccctcagcgtg
gcgaacctggacttctag
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