Rhodovulum sp. P5: RGUI_2448
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Entry
RGUI_2448 CDS
T04813
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rhc
Rhodovulum sp. P5
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_2448
Enzymes [BR:
rhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGUI_2448
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RGUI_2448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ARE40589
UniProt:
A0A1V0PWR4
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Position
2348043..2351423
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AA seq
1126 aa
AA seq
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MTRNPATERQIQAADPVNSTWLSANAGSGKTRVLTDRVARLLLDHVRPERILCLTYTKAA
ASEMQNRLFSRLGNWAMLDDTELGRTLWELGVDGPVDPDMLRQARRLFARAIETPGGLKI
QTIHSFCAGLLRRFPLEAGVSPGFADLDERTAKRLRAEIVEDMAEGPEAGLLADLARYYT
GDDLDGLTAEIAGHRDRLAKSMEDPAIWRLFGLPREYDETTLLAQVFLGGENDLIRQVVP
VLAAGSKTDQKAAATLDPLVGEGPGLPLLTQLEGLFLTGATAKSPFSAKIGSFPTKATQK
ALGSLMADLDALMVRVEDARQRRIALSAARRTRALHRFAGAFLKRYEARKLAQGWLDFDD
MILKARTLLTDPGVAQWVLFRLDGGLDHILVDEAQDTSPVQWDVIELLAQEFTAGEGARS
GVERTIFVVGDKKQSIYSFQGADPDGFDRMKATFRDRLAGIDRNLVPLTLEYSFRSAEAI
LSVVDKTFPPDTPHGLDREMRHRAFHGDLPGRVDLWPVVEESATDEPGHWADPVDMPAAE
HHMVRLARRVAAEVRAMIDRGETLAVKHKDGRITRRPVTEGDFLILVQRRSDLFYEIIRA
CKAEGLEIAGADRLKIAAELAVRDLVALLSFLALPEDDLSLACALRSPLFGWSEDALYRL
GAKRGKAYLWQTLRGADWAETETVSVLKSLRDEADFLRPYELLERILTRHDGRRRLTARL
GQEAEDGIDALLDQALAYERVEVPSLTGFLAWLESGEVEVKRQLDSAGDRIRVMTVHGAK
GLEAPIVILPDCGARRVDIRDQLLTLDDGSVVWKTPSGERPTRLEDAYARRITREQAERQ
RLLYVAMTRAEQWLIVGAAGKLSPDGSDWYSLVQAGMHRAGADPQDFAFGAGLRVDRGHW
QKGDVEQPADIIAQPADLPEWAMVEVPRPERPAQPVSPSNLGGAKILGGDGEGLEAEAAK
ARGTWIHLLLEHLTDVAEEARAQQASALLTTCTPSAAETEIAQLVEEAQRILATPDLAHV
FAPETLAEVELAAPIGQTMIRGTIDRLLVAPDHVLAVDFKTNAVVPSHVDDVPEGLLRQM
GAYAQALTQIYPAHRIETAILWTRTATLMPIPPGLAAAALARAALP
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgacacggaacccggcgaccgagcggcagattcaggcagccgaccccgtcaactccaca
tggctgtcggccaatgccgggtcgggcaagacgcgcgtcttgaccgaccgggtggcgcgg
ctgttgctggaccatgtgcggccggagcggatcctgtgcctgacctacaccaaggccgcg
gcaagcgagatgcagaaccggctgttcagccgtctgggtaactgggcgatgctggacgat
accgaactgggccgcaccctgtgggagcttggggtcgacggcccggttgatccggacatg
ctgcggcaggcgcggcggctgttcgcgcgcgcgatcgagacgccgggcgggttgaagatc
cagacgatccactccttctgcgcggggctgttgcgccgctttccgctggaggcgggggta
tcgccgggctttgccgatctggatgagaggaccgcgaaacgcctgcgcgccgagatcgtg
gaggacatggccgaggggccggaggcggggctgctggccgatctggcgcggtactacacc
ggcgacgatctggatggcctgaccgcggagattgccgggcatcgggacaggctggcgaag
tcgatggaggacccggcgatctggcgccttttcggcctgccgcgggagtatgacgagacg
acccttctggcgcaggtgtttcttgggggcgaaaacgatctgatccgccaagtggtgccg
gttctcgccgcgggcagcaagaccgatcagaaggccgcggcaaccttggacccgttggtc
ggggaaggccccggcttgcccttgctgacacagttggagggcttgttcctgaccggggcg
actgcgaaatcgccgttttcggccaagatagggtctttcccgaccaaggcgacgcaaaag
gccctgggttcgttgatggccgatctcgatgcgctgatggtccgggtggaggatgcccgg
caacggcgcatcgccctgtccgccgcgcgccggacgcgcgcgctgcaccgctttgcgggg
gcgttcctgaaacgctacgaggcgcggaaactggcgcaaggctggctcgacttcgacgac
atgatcctgaaggcgcgcacgcttctgaccgatccgggtgtcgcgcaatgggtgctgttc
cggctcgatgggggcttggatcatatcctcgtggacgaggcgcaggataccagccccgtg
cagtgggatgtgatcgagcttctggcgcaggaattcaccgccggcgaaggcgcacggtcc
ggggtggagcggacgatcttcgtcgtcggcgacaagaaacagtcgatctattcgtttcag
ggcgcagatcccgacgggttcgacaggatgaaggccaccttccgggaccggctggccggg
atcgaccgcaatcttgtgccgctgacgctcgaatattccttccgctccgccgaggcgatc
ctgtcggtcgtcgataaaacctttccgccggacacgccccatgggctggatcgggaaatg
cggcaccgtgcctttcatggcgatctgcccggccgggtggatctgtggcccgtggtcgag
gagtccgccacagacgagcccggccattgggccgaccccgtcgacatgcccgcggcagag
catcacatggtgcgccttgcccggcgtgtcgccgcagaggtccgcgcaatgatcgaccgg
ggcgagacgctggcggtcaagcacaaggacggccggatcacccgccgcccggtgaccgag
ggcgatttcctgatcctcgtccagcggcggtcggatctgttctatgaaatcatacgcgcc
tgcaaggccgaggggctggagatcgccggggccgaccgcctgaaaatcgcggccgaactt
gcggttcgcgatctggtcgcgctgctgtcattcctggccttgcccgaggatgacctgtcc
cttgcctgtgcgctgcgttcaccgctgttcggctggtcggaagatgcgctctaccggctc
ggcgcgaaacggggaaaggcctatctgtggcagaccctgcgcggggcggattgggctgaa
acagagactgtatcggtattgaaatccctgcgggacgaggccgatttcctgcggccctac
gagttgcttgaacggatcctgacccggcatgacggacgccgccgcctgaccgcgcggctg
gggcaagaggccgaagacgggatcgacgcgctgctggatcaggcgctggcttacgaacgg
gtcgaggtaccttcgctgaccggctttctcgcctggctggaaagtggcgaggtggaggtc
aagcgccagctcgattccgcgggcgaccggatccgcgtgatgaccgtgcatggcgcaaag
gggttggaggcccccatcgtcatcctgcccgattgcggggcgcgccgcgtcgatatccgc
gatcagttgctgaccctcgacgatggcagcgtggtctggaaaaccccgtccggggagcga
ccgacacgtctggaagacgcctatgcccggcgcatcacgcgggaacaggcagagcggcag
cgcctgctttacgttgccatgacccgggccgaacagtggctgatcgtgggggcggctgga
aagctgtcgccggacgggtccgactggtacagccttgttcaggccgggatgcaccgcgca
ggcgcggatccccaggatttcgcgttcggggcgggcctgcgcgtcgaccgcggacactgg
cagaagggggacgtcgagcagcccgcagacataatcgctcaacccgctgaccttcccgaa
tgggcgatggtcgaggttccgcggcccgaacggcccgcccaaccggtttccccctccaac
ctcggcggggcgaagatccttggcggggacggcgaggggctggaggcggaggccgcgaag
gcgcgggggacgtggattcacctgttgctggaacacctgaccgacgtggcagaagaggcc
cgcgcacagcaggccagcgccttgctgacaacatgcacaccatccgcggcggagaccgag
atcgcgcagcttgtggaagaagcgcaaaggatcctcgcgacacccgatcttgcccatgtg
tttgcgcccgagacactggccgaggtcgagcttgccgcgccgatcggtcaaaccatgatc
cgtggcaccatagatcggttgctggtcgcccccgaccatgtgctggccgtcgatttcaag
accaacgccgtggtgcccagccatgtcgacgatgtgcccgaggggttgttgcgccagatg
ggggcctatgcgcaggcgctgacccagatctatcccgcccatcgaatcgagacggcaatc
ctgtggacgcgaaccgcgacgctgatgccgatcccgcccgggcttgccgcggcggccttg
gcccgcgctgcgctgccttga
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