Rhodovulum sp. P5: RGUI_3292
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Entry
RGUI_3292 CDS
T04813
Name
(GenBank) DNA polymerase II
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc03030
DNA replication
rhc03430
Mismatch repair
rhc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGUI_3292
03430 Mismatch repair
RGUI_3292
03440 Homologous recombination
RGUI_3292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhc03032
]
RGUI_3292
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_3292
Enzymes [BR:
rhc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGUI_3292
DNA replication proteins [BR:
rhc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGUI_3292
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGUI_3292
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ARE41433
LinkDB
All DBs
Position
complement(3270579..3271607)
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AA seq
342 aa
AA seq
DB search
MKLSGRAATRYFTRPEPERIGLLIYGSDAMRVALKRQEVLAALLGPGAEDELRLTRLHAS
EVRSDPAALADALKARGFFPGPRAVFVDEATDGLADTIAAALADWQDGDAQLVVTARQLA
PRSALRKLFEGHTNAYAAAIYDDPPGRDEIEAMLAQAGLGDLDRAAMGALLDLATQIDPG
DFRQTVEKLSLYKLDDATPVSPEDVAACAPRSTEADADDLINVVAEGRRGEIGPILRRLQ
AQGVTPVALCIAATRHFRRLHAAASDPEGAATGIQRLRPPVPFKVKDSMTRQAQGWGRAN
LETALSLLIDTDLQLRSSSRAPQMALMERSLFRLAQLGKRRA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttcggggcgcgcggcaacccggtacttcacccggcccgaaccggagcgcatc
ggccttctgatctatgggtcggacgcgatgcgcgtcgcgctgaaacggcaagaggttctg
gccgccctgcttggccccggtgccgaggacgaattgcggctgacccgccttcatgcgtcc
gaggtgcggagcgacccggcagccttggccgatgcgctgaaggcccgcgggttctttccc
ggcccgcgcgcggttttcgtggacgaggcgaccgacgggttggccgacaccatcgcggcc
gcattggcagactggcaggacggcgacgcgcaactggtggtgaccgcgcggcagcttgcc
ccccgctctgccctgcgcaagctgttcgaggggcataccaatgcctatgcggcggcgatc
tatgacgatcccccgggacgggacgagatcgaggcgatgctggcccaggccgggttgggc
gatctggaccgggccgcgatgggggcgcttctggatctggcaacacagatcgaccccggc
gatttccggcaaacggtggagaaactgtcgctctacaagctggatgatgccacgcccgtc
agccccgaggatgtcgccgcctgcgccccccgctcaaccgaggccgatgccgacgacctg
atcaacgtcgtggccgagggccgccggggcgagatcggcccgatcctgcggcgattgcag
gcccagggcgtgacccccgtcgcactatgcatcgccgcgacccgtcatttccgccgtttg
catgccgcagccagtgacccagagggcgcggccacgggcatccagcggctacgcccgccc
gtgcccttcaaggtcaaggacagcatgacgcgtcaggcacaaggctggggccgcgcgaat
ctggagaccgcgctttcccttctgatcgacaccgacctgcaactgcgctcctcctcccgc
gcgccgcagatggcattgatggagcgcagcctgttccgccttgcgcaactgggcaagcgc
cgggcctga
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