Rhodovulum sp. P5: RGUI_3506
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Entry
RGUI_3506 CDS
T04813
Name
(GenBank) NAD-dependent formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc00630
Glyoxylate and dicarboxylate metabolism
rhc00680
Methane metabolism
rhc01100
Metabolic pathways
rhc01120
Microbial metabolism in diverse environments
rhc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RGUI_3506
09102 Energy metabolism
00680 Methane metabolism
RGUI_3506
Enzymes [BR:
rhc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RGUI_3506
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_10
Fer4_9
Fer4_6
Fer4_21
Fer4_2
Fer4_18
Fer4_16
Fer4_8
Fer4_4
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
ARE41647
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All DBs
Position
complement(3497272..3500142)
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AA seq
956 aa
AA seq
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MKDFIIPDPDFGTPLRQSDKTVTLTIDGQRVTVAEGTSVMRAAAEAGIEIPKLCATDSVE
PIGSCRLCMVEIEGRRGTPASCTTPAAEGMEVRTQTDKLSRLRRGVMELYISDHPLDCLT
CAANGDCQLQDMAGAVGLREVRYTPGANHFETRQNGEANPRYIAKDQTNPYFTYDPAKCI
ACYRCVRACEEVQGTFALTVEGRGFEARISTGAANFLSSDCVSCGACVQACPTATLQENA
VIEHGTPDHAVVTTCAYCGVGCSFRAEMQGDRLIRMVPWKDGKANRGHSCVKGRFAWGYA
NHPDRITTPLIRETIQDPWREASWEEAFRFAADRLNKIRAEHGPGAIGGITSSRCTNEET
FLVQKLIRQVFGTNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVEHTDVVLVIGANP
TDGHPVFGSRLKKRLRQGAKLIVADPRRIDLVKGPHVAAAHHLALRPGTNVALLTAMAHV
IVTEGLTDDAFIRERCDLDAYADWANFVSEDRVSPEATEHLTGVPADEVRQAARLYATGG
NAAIYYGLGVTEHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHVHDAEARATFEKVWGTTLSDEPGLRIPNMLDAAVDGSFRGIYIQGEDILQSDP
DTKHVAAGLAAMDCVIVHDLFLNETASYAHVFLPGSTFLEKDGTFTNAERRLNRVRRVMA
PSNGLADWEVTQGLAQAMGADWAYAHPSEIMAEIAATTPAFGGVTYDLLDREGSVQWPCN
DASPQGTPVMHEDGFVRGKGLFVVTDYVPTDERTGPRFPLLLTTGRILSQYNVGAQTRRT
DNTVWHPEDILEIHPHDAETRGINDHEWVRLASRSGETTLRATLTERVNPGVVYTTFHHP
ETQANVVTSDYSDWATNCPEYKVTAVQVSPSNGPSDWQVRQAEFTRRARRIDTAAE
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttcatcattcccgaccccgatttcggcacccccctgcgccagtcggacaag
accgtcaccctgaccatcgacggccagcgtgtcaccgtggccgagggcacctctgtcatg
cgggccgcggctgaggcggggatcgagatccccaagctttgcgccaccgacagcgtggag
cccatcggctcctgccggctgtgcatggtggagatcgaggggcggcgggggacgcccgcc
tcctgcaccacgcccgccgccgaggggatggaggttcgcacccagaccgacaagctctcc
cgcctgcggcgcggggtgatggagctttatatctccgaccacccgcttgactgcctgacc
tgcgcggcgaatggcgattgccagttgcaggacatggcgggcgccgtcggcctgcgcgag
gtccgctatacccccggcgccaaccatttcgagacccgccagaatggcgaggcgaacccg
cgctatatcgccaaggaccagacgaacccctatttcacctatgaccctgcgaaatgcatc
gcctgctatcgctgcgtgcgtgcctgcgaagaggttcagggcaccttcgccctgacggtg
gaggggcgtgggttcgaggcgcgcatatcgaccggcgccgccaatttcctgtcgtcggat
tgcgtcagttgcggcgcctgcgtgcaggcctgcccgaccgccacgctacaggaaaacgcg
gtgatcgagcacggcacccccgaccacgctgtggtcaccacctgcgcgtattgcggcgtg
ggatgcagcttccgggcagagatgcagggcgaccggctgatccgcatggtaccgtggaag
gacggcaaggcgaaccgcggccatagctgcgtcaagggccggtttgcatggggctatgcc
aaccatcccgaccgcatcacgaccccgctgatccgcgagaccatacaggacccgtggcgc
gaggccagttgggaggaagctttccgctttgccgcggaccggctgaacaagatcagggcc
gagcacggccccggcgccatcggcggcatcacatcgtcacgctgcacgaacgaggaaacc
ttcctcgtgcaaaagctgatccggcaggtctttggcaccaacaatgtcgacacctgcgcg
cgggtctgccattcgccgacgggctatgggttgaagacaaccttcggcacctctgccgga
acgcaggacttcgacagtgtggaacacaccgacgtggtgctggtgatcggggcgaacccg
accgacgggcacccggtctttggcagccggttgaagaagcgcctgcggcagggcgccaag
ctgatcgtcgcagatccccggcggatcgatcttgtgaaaggtccacatgtcgctgccgcg
catcatctggcgctccgccccggtaccaatgtcgcgctgctgaccgcgatggcccatgtt
atcgtcaccgaggggttgaccgatgacgccttcatccgggaacgctgcgatctggacgcc
tatgccgactgggcgaatttcgtgtcggaggaccgggtcagccccgaggccaccgagcat
ctgaccggcgtcccggccgacgaggtgcgccaggccgcgcgcctgtatgccaccgggggc
aatgctgcgatctattacgggctgggcgtgacggagcacagccagggctccaccaccgtg
atggcgattgcgaaccttgccatggcgacgggcaatatcgggcgcccgggggtgggggtg
aacccgctgcgcggccagaacaatgtgcagggttcctgcgacatgggatcgttcccgcac
gagttgccgggctatcgccatgtgcatgacgcagaggcccgcgcaacctttgaaaaggtc
tggggcacgacgctgtcggacgaaccgggcctgcgcatccccaacatgctggacgctgcc
gtcgatggcagtttccgcggcatctacattcagggggaggacatcctgcaatcggatccg
gacaccaagcatgtggccgcagggctggccgcgatggactgcgtcatcgtccacgacctg
ttcctgaacgagacggcgagttatgcgcatgtgttcttgcccggctctaccttccttgaa
aaggatggaaccttcaccaatgccgaacgccgcctgaaccgcgtgcgacgggtgatggcg
cccagtaacgggctggccgattgggaggtcacgcaaggtctggcgcaggcgatgggcgcg
gactgggcctatgcccacccgtccgagatcatggcagagatcgcggcaaccaccccggcc
ttcgggggtgtgacctatgatctgctggatcgggaaggatcggttcagtggccctgcaat
gacgcctcgccacagggcacgccggtgatgcacgaggatggcttcgtccgcggcaagggg
ctgttcgtcgttaccgactatgtgcccacggatgagcgtaccggcccacgcttcccgctg
ttgctgaccacgggccgcattctcagccagtacaatgtcggcgcccagacccggcgaacg
gacaacaccgtctggcatccggaggatattctggaaatccacccccacgatgccgaaacc
cgcgggatcaacgaccatgagtgggtcaggctcgcctcccgctcgggcgagacgacgctg
cgggccacgctgaccgaacgggtcaatccgggcgtcgtctataccacgttccaccacccc
gagacgcaggccaatgtcgtgacctcggactattccgactgggccacgaactgccccgaa
tacaaggtcacagcggtacaggtcagcccgtcgaacggcccctccgactggcaggtgcgg
caggcagaattcacgcggcgcgcccggcgcatcgacacggcggcggaatga
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