Rhodovulum sp. P5: RGUI_3540
Help
Entry
RGUI_3540 CDS
T04813
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc00020
Citrate cycle (TCA cycle)
rhc00480
Glutathione metabolism
rhc00720
Other carbon fixation pathways
rhc01100
Metabolic pathways
rhc01110
Biosynthesis of secondary metabolites
rhc01120
Microbial metabolism in diverse environments
rhc01200
Carbon metabolism
rhc01210
2-Oxocarboxylic acid metabolism
rhc01230
Biosynthesis of amino acids
rhc04146
Peroxisome
Module
rhc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhc_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RGUI_3540
09102 Energy metabolism
00720 Other carbon fixation pathways
RGUI_3540
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RGUI_3540
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RGUI_3540
Enzymes [BR:
rhc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RGUI_3540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
ARE41681
LinkDB
All DBs
Position
complement(3536541..3537755)
Genome browser
AA seq
404 aa
AA seq
DB search
MTKIKVDNPVVELDGDEMTRIIWDFIKKKLILPYLDVDLLYYDLGIEERDRTDDQITIDA
ANKIKEVGVGVKCATITPDEARVEEFGLKKMWRSPNGTIRNILGGVVFRAPIICNNVPRL
VPGWTKPIVIGRHAFGDQYRATDMKFPGPGTLSMKFVGEDGTVIEEEVFKAPSSGIYMGM
YNLDESIKDFARASMNYALSMGWPLYLSTKNTILKQYDGQFMILFQKVFDEEFADKFKEA
GITYEHRLIDDMVACAMKWNGGFVWACKNYDGDVQSDTVAQGFGSLGLMTSQLMTPDGKI
VEAEAAHGTVTRHYRQHQKGEATSTNSIASIFAWTGGLKHRAKLDGNDQLKHFAETLEKV
VVATVESGSMTKDLALLVGPNQKWLTTMGFLEKVDENLNKALAG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagatcaaagtcgacaacccggtcgtcgaactcgacggcgatgaaatgacccgg
atcatctgggacttcatcaagaagaagctgatcctgccctatctcgacgtggacctgctc
tactacgatctggggatcgaagagcgcgaccggaccgacgaccagatcaccatcgacgcc
gccaacaagatcaaggaagtcggcgttggcgtgaaatgtgccaccatcacgccggacgag
gcgcgggtcgaggaattcggtctcaagaagatgtggcgcagccccaacggcacgatccgc
aacatcctgggtggcgtggtgttccgcgccccgatcatctgcaacaacgtcccccggctt
gttcccggctggacgaaacccatcgtgataggccgtcatgcctttggcgaccagtaccgc
gcgacggacatgaagttccccggcccgggcacgctgtcgatgaaattcgtcggcgaggac
ggcaccgtgatcgaggaagaggtcttcaaggccccgtcctcgggcatctacatgggcatg
tacaaccttgacgagtcgatcaaggacttcgcccgggcctcgatgaactatgcgctgtcg
atgggctggccgctgtacctgtcgaccaagaacacgatcctgaagcagtatgatggccag
ttcatgatcctgttccagaaagtgtttgacgaggaattcgcggacaagttcaaggaagcc
ggcatcacctacgaacaccgcctgatcgacgacatggtcgcctgcgcgatgaaatggaac
ggcggctttgtctgggcgtgcaagaactacgacggcgacgtgcagtcggacaccgtggcg
caaggcttcggctcgctcggcctgatgaccagccaactgatgacgccggacggcaagatc
gtggaggccgaggccgcccacggcaccgtcacccgccattaccgccagcaccagaagggg
gaggcgacctcgaccaactccatcgcctcgatcttcgcctggaccgggggcctgaagcac
cgcgcgaaactggacggcaacgaccagctcaagcatttcgccgaaacgctggaaaaggtc
gtggtcgcgaccgtggagtcgggatccatgaccaaggacctcgcgcttctggtcgggccc
aatcagaaatggctgacgacgatgggcttcctcgaaaaggtcgacgagaacctgaacaag
gcactggcgggctaa
DBGET
integrated database retrieval system