Rhodovulum sp. P5: RGUI_3583
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Entry
RGUI_3583 CDS
T04813
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGUI_3583
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhc02000
]
RGUI_3583
Transporters [BR:
rhc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RGUI_3583
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ARE41724
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Position
3590511..3591617
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AA seq
368 aa
AA seq
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MKLKSILLTTGAALLAAPLAHAEDMADSMTLVSWGGAYQESQKNAYTEPYKAMHPEVEVI
WDSSSNEAVAKLRAMNEAGNVTWDLVDVTGADAMRLCDEGLAMEIDADEDLAPAPDGTPA
SEDFGDMIISDCFIPQIVYSTTFGYRTDMVGDTPPESVCAIFDTETYPGKRSLEKRPINN
VEWALVCDGVPADEVYDVLETEEGQDRALAKLDTIKDDVIWWSAGADTPQLLADGEVVMG
STYNGRLFSLIEEQDQPVAMLWDYQVFDLDGWIIPAGLPADRLARVMDFLYFATDTQRLA
DQAKYISYGPARASSAPLVSKHATLGIEMAPHMPTDPANAKTAVLYNFEFWADYRDDLDA
KFQAWLAK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaagcatcctgctgacgacaggtgcggcgctgcttgccgcgcccctcgcc
catgccgaggatatggcggactccatgacgctggtgtcctggggcggcgcctatcaggaa
agccagaagaacgcctataccgaaccctacaaggccatgcaccccgaggtcgaggtcatc
tgggattccagttccaacgaggcggttgccaagctgcgcgcgatgaacgaggcgggcaac
gtcacctgggatttggtggacgtgaccggggctgacgcgatgcggctttgcgatgaaggc
ctcgcgatggaaatcgatgccgacgaggaccttgcccctgcgccggacggcaccccggcg
tcggaagacttcggcgacatgatcatcagcgactgcttcatcccgcagatcgtctattcg
accaccttcggctaccgtaccgacatggtgggcgacacgccgcccgaaagcgtctgtgcg
atcttcgacaccgaaacctacccgggcaagcgcagccttgagaagcgtccgatcaacaac
gtcgaatgggcccttgtctgcgatggcgtgcccgccgacgaagtgtacgacgtgctggaa
accgaggaagggcaggaccgcgcgctggccaagctcgacacgatcaaggatgacgtgatc
tggtggtctgcgggtgccgacacgccgcagcttctggccgatggcgaagtcgtgatgggc
tccacctacaacggtcgtctgttcagcctgatcgaagagcaagaccagccggtcgccatg
ctgtgggactatcaggtgtttgaccttgacggctggatcattcccgccggcctgcccgcg
gatcgtctcgcccgcgtgatggacttcctctatttcgcgacggacacccagcgccttgcc
gatcaggcgaagtacatctcctacggtccggcgcgtgcgtcgtctgcgccgctggtgagc
aagcacgccacgcttggcatcgagatggcaccgcacatgccgaccgatccggcgaacgcc
aagacggccgttctctataactttgagttctgggcggactaccgcgacgacttggacgcc
aagttccaggcctggctggcgaagtaa
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