Rhodovulum sp. P5: RGUI_4102
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Entry
RGUI_4102 CDS
T04813
Name
(GenBank) Oligopeptide transport system permease protein OppB
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGUI_4102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhc02000
]
RGUI_4102
Transporters [BR:
rhc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RGUI_4102
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_16
AAA_29
AAA_22
AAA_21
nSTAND1
Sigma54_activat
nSTAND3
AAA_23
DUF3987
Hpr_kinase_C
PRK
AAA_33
ATP-synt_ab
Zeta_toxin
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ARE42243
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Position
4114471..4116075
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AA seq
534 aa
AA seq
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MTAVLDIRGLSVSLPKHADRPYAVQDITFQVEKGEIVCVVGESGSGKSVTAFTVMGLHDR
RALTPTAGEILLEGENILADNDRRIRKLRGEKMAMIFQEPMTALNPVARVGDQIAEMLEI
HTDLSATERRKKVVAAMADVHLPDPEKMYDSYPHQLSGGQRQRIMIAMALVLEPVLLIAD
EPTTALDVTTQAQILVLIRELQERRGMGVLFITHDFGVVAEIADRVLVMQHGRVVEQGPV
AEVLGNPQHDYTKMLIGAVPSMEPPARAPARAAKVIEARHLDKRYGTKGLFGGGRVVHAA
QDVNFVVNRGETLGIVGESGSGKSTVARCVMRLIDPTSGGILINGEDIAALREGAMRDHR
RDIQIVFQDPYRSLNPRRTVGQSIVEGPMNFGIPAGEARHRAERLMRIVGLDPAALERFP
HQFSGGQRQRICIARALAMEPVALIADEAVSALDVSVQAQVLDLLEEVRKEFDLAMLFIT
HDLRVAAQVCDRIMVMQHGVVVESGPTADVYANPQHAYTRALLAAAPGHHMLDG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggttctggatatccgcgggctgtctgtcagcctgcccaaacatgccgaccgg
ccctatgcggtgcaggacatcacctttcaggtcgaaaagggcgaaatcgtctgcgtcgtg
ggcgaatccggatcgggcaaatcggtgaccgccttcacggtcatgggcctgcacgaccgg
cgcgccctgacccccacggcgggcgagatcctgctggagggggagaacatcctcgccgac
aacgaccggcgcatccgcaagctgcgcggggaaaagatggcgatgatctttcaggagccg
atgacggccctgaaccctgtggcccgcgtgggcgaccagatcgccgagatgctggagatt
cacaccgacctgtccgcgacagagcgtcggaaaaaggtcgtcgccgcgatggccgacgtg
catctgcccgacccagaaaagatgtatgacagctatccgcatcagctttcgggcgggcag
cggcagcggatcatgatcgccatggcgctggtgctggaaccggttctgctgatcgcggac
gaacccaccaccgcgctcgacgtcacaacgcaggcgcagatcctcgtgctgatccgcgaa
ttgcaggaacggcgcggcatgggtgttctgttcatcacccatgatttcggcgtggtggcg
gaaatcgccgaccgggtgctggtgatgcagcacggccgggtggtcgagcagggcccggtg
gcagaggttctgggcaacccccagcacgattacaccaagatgctgatcggcgccgtcccg
tcgatggaaccgcccgcccgcgcgcccgcaagggccgccaaggtgatcgaggcgcggcat
ctggacaagcgctacgggaccaaggggctgttcgggggcgggcgcgtggtccatgcggcg
caggacgtgaacttcgtcgtgaaccggggggagacgctgggcatcgtcggcgaaagcggg
tctggcaagtccaccgtggcgcgctgcgtgatgcgcctgatcgacccgacctcgggcggg
atcctgatcaatggcgaggatatcgccgccctgcgcgagggcgcgatgcgcgaccatcgc
cgggacatccagatcgtgttccaggatccctaccgctcgctcaacccgcgccggacggtc
ggccagtccatcgtcgaggggccgatgaatttcggcatcccggcgggagaggcccggcac
cgcgccgaacggctgatgcggatcgtggggcttgaccccgccgcgctggaacggttcccg
caccagttttccggcgggcagcgacagcggatttgcatcgcccgtgccctggcgatggaa
cccgtggcgctgatcgcggatgaggccgtgtcggcgctggacgtctccgttcaggcgcag
gtgctggacctgctggaagaggtgcgcaaggagttcgatcttgccatgctgttcatcacc
catgacctgcgggtggccgcgcaggtctgcgaccggatcatggtgatgcagcacggggtg
gtggtggaaagcggccccacggccgatgtctatgccaacccgcagcacgcctataccagg
gcccttctggccgcggcgccgggccatcacatgctggacggataa
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