Rhodovulum sp. P5: RGUI_4311
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Entry
RGUI_4311 CDS
T04813
Name
(GenBank) MSHA pilin protein MshA
Organism
rhc
Rhodovulum sp. P5
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
FG-GAP
FG-GAP_3
HemolysinCabind
IL33_bt
Motif
Other DBs
NCBI-ProteinID:
ARE42337
UniProt:
A0A1V0Q2B8
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Position
pRGUI01:complement(74302..79227)
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AA seq
1641 aa
AA seq
DB search
MVNVIIASAVAVEGGYLNFTVTLSEAAPDAITMSYRTLMDTADDGDLYYAATSSYNNGTI
TFAPGETSVEITIRTDGDYADERDENIVLELYNLSENAAFAGGEQQLRAMGVILDDDGTG
PNLALFVSDPIIEEGDSGTKGAVFELRLSRPAESVFTVTYATRDISAVAGEDYGARAGSV
TFSAGQDVATVRVPVYGDTVFEGTESFALVVDAPANPSIGIEGLAGEATIRDDDADPWPS
VSISSARATEGSYLRFVVTLSEPSLDAVTLSYRTLMDTADDGDLYYAATSSYNNGTITFA
PGETSVEVTIRTDGEYDDERDENIVLELYNLSENAEFAGGEQQLRATGVILDNDGTGSNL
ALFVSNPVLEEGDSGTKEAVFELRLSQPATTAFTVTYATRDISAQAGVDYLAQSGSVSFA
AGQDVATVRVQVYGDTTVEGTESFALVVDAPASPLVSTEGLAGEATIRDDDAGLWPSVSI
ASATATEGSYLRFTVTLSEPSLDAITMSYRTLRDTAGDDDLSYATTSNYNNGTITFSPGE
TSADILIRSDGEYDDERDENIVVELYNLSENAEFADGEQQLRATGVIRDNDGTGPNLALF
VSDPVLAEGDSGTREALFELRLSQPATAAFTVTYATRDISAQAGVDYAAQSGSISFAVGQ
DVATVRVPVYGDYTAEATESFALVVDTPDSPFIDTEGLVGEATILDDDANIGPSVSISSA
QASETYEYLRFTVTLSEPSVDAVAMSYRTLQDTADDSDMYYATTSDTYNNGTIAFAPGET
STDIFIRTDSDSVDERDENVVLELYNLSANATFAGGELQLRATGVILDDDGTGPNLALFV
SDPILVEGDGGTKEAVFELRLSQPAGTDFTVTYATQDITAIAGQDYAARSGTVSFATGQD
VATVRVPVYGDTMPEMNESFALVVEAPTSPSITFEGLAGEATIRDDDSSQWPGVSISSAT
ALEWGYSGYLRFVVSLSEASDVPVQISYQTDLGDALQSDLYYSDNTGVLDFAPGETSKSV
FIRTDSDSLDERDESVFLRLTSYQVGESYVTFPDDQNAMTAVGFILDDDGVGPNRMLAAL
PTSVREGDSCDPVHFVPVYLSSPAADTLVFDVSAQNGTATAGVDFELLTDTVTFLPGQTS
AAVQVAIFGDRAEEGTESFTLSFAPATDTPFVGTIQNRGVTILDMVDVPDGSYYGTNGSE
SVTLTSGNDTYYAYGGNDTVSGGSGHDVLHGCDGNDRLLGGSGDDILYGEGGMDTLTGGD
GSDVFHLSSNFPTGTSYHDTITDFTGEDVIRFHDGLALISASSGAAETQLHFDTDSDGAA
DAILTLRGDFRDYEFHTRAYDDDEVEAYLNVQTGSGGASTRGDFNGDGTSDILWRKSAGH
VGYFEMENGGHTYHAIGWAGTDWSVEGTGDLNGDGTSDILWRKSAGHVGYFQMENGTHSY
HAIGWAGTDWTVQGLGDLNGDGTDDILWRKSAGHVGYFEMDNGSHTYQAIGWAGTDWTVV
GIGDLNGDGTDDILWRKSAGHVGYFEMDNGSHTYHAIGWAGTDWSVEGVGDLNGDGTDDI
LWRKDTGHVGYFEMHDGQDTYHAIGWAGTDWSVEGVGDVNGDGTDDVIWRKDTGRVSYWE
MNDGDATYHAIADVGTDWQIV
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgttatcattgcgtctgctgtcgctgttgaaggcggctatctgaatttcacg
gtaacgttgtcggaagccgcgcctgacgccatcacgatgtcctaccggacgctgatggat
acagccgacgatggcgatctctactacgcggcgaccagttcttataacaatggcacaatc
acctttgcgcccggcgagacatcggtcgagataacgattcgaacggacggggattatgca
gacgaacgcgacgagaacatcgtgctcgaactgtacaatctcagcgaaaacgcggcattc
gcgggcggcgagcagcagcttcgcgcaatgggcgtgatcctcgacgatgacgggaccggg
ccgaaccttgcgctgttcgtgtccgatccgataatcgaagagggcgacagcggcaccaag
ggagcagtgttcgaactgcgcctgtcgcgcccggcggaaagcgtcttcaccgtgacttat
gccacacgcgacatttcggccgtcgcgggcgaagactatggggcaagggcgggcagcgtg
acattctcggccgggcaggacgtggccacggtccgcgtacccgtctatggcgatacggtc
ttcgaagggacggaaagctttgcacttgtggtcgatgcgccggccaacccgtcgatcggt
atagagggtctggcgggtgaagcgacaatccgtgacgacgatgcggacccatggcccagc
gtctcgatctcgtccgcccgcgccacggaaggatcctatctgcgctttgtggtgaccctt
tcggaaccgtcgctggacgcggttacgctctcctaccgcacgctgatggataccgccgat
gatggcgatctctactacgcagcgaccagttcctacaacaatggcacgatcacctttgcg
cccggtgagacctcggtcgaggtaacgatccgaacggacggcgagtatgatgacgagcgc
gacgaaaacatcgtgctcgaactctacaacctcagtgaaaatgcggaattcgcaggcggc
gagcagcagctccgcgcaacaggggtgattctcgacaatgatgggacggggtcaaatcta
gcgctgttcgtgtcgaaccctgttctggaagagggcgacagcggcaccaaggaagcggtg
ttcgaattgcgcctgtcgcagccggcgaccacggccttcacggtgacctatgccacgcgc
gatatctcggcccaggccggggtcgactatcttgcgcaatcgggaagcgtaagctttgcg
gccgggcaggacgtggccactgtacgcgtgcaagtctacggcgacacgaccgtcgaggga
acggaaagctttgcgctggtggtcgacgcacccgccagcccgctggtctcgaccgagggg
cttgcgggcgaggcgacgatccgagacgacgatgccgggttgtggccgagcgtctccatc
gcttccgccacggccaccgaagggtcctaccttcgcttcaccgtgacgctgtcggaaccg
tcgctggacgcgatcacaatgtcctatcggacgcttcgcgacacggccggtgacgacgat
ctttcttatgcgacgaccagcaactacaacaacggaacaatcaccttttcgcccggggaa
acctcggcagacatcctcatccgaagcgatggtgagtatgacgacgagcgcgatgaaaac
attgtggtcgaactctacaacctcagcgaaaatgcagaattcgcggacggcgaacagcag
cttcgcgcgaccggcgtgatccgcgataatgacggcaccggtccgaatctcgcgctgttc
gtatccgatccggttcttgccgaaggcgacagcggcaccagggaggcgttgttcgaactg
cgcctgtcgcagcctgcgaccgcggccttcacggtgacctatgccacccgcgatatctcg
gcccaggccggggtcgactatgccgcgcagtcgggcagcataagcttcgcggtcggacag
gacgtggccacggtgcgcgtaccggtctacggcgactatacggccgaagcgacagagagc
tttgcccttgtggtcgatacaccggacagcccgtttatcgacaccgaaggtcttgtgggc
gaggcgacgatccttgacgacgatgccaatatcggacccagcgtttcgatttcttccgca
caggccagtgaaacatacgagtatctccgtttcaccgttacactgtcagagccgtcggtg
gacgcggtcgcgatgtcctacagaacgcttcaggacacggctgatgacagcgacatgtac
tatgccacgaccagcgacacctataacaatggcaccatcgcttttgcaccgggcgaaacg
tcgacggatatcttcatccgaaccgactcagacagcgtggacgagcgcgacgaaaacgtt
gtcctcgaactctacaacctcagcgcaaacgccacattcgccggcggtgagttgcagctg
cgcgcgacgggcgtaatcctcgacgatgacggcacggggccgaaccttgcgctgttcgtg
tccgatcccattctggtcgaaggcgacggcggcaccaaagaggcggtgttcgagttgcgc
ctgtcgcaaccggcaggaaccgacttcacggtgacctacgccacgcaggacatcaccgcc
atcgccgggcaggactatgccgcgcgctcgggcaccgtgtccttcgccaccgggcaggac
gtggcgacggtgcgggtgcctgtctatggcgacacaatgccggaaatgaacgagagtttc
gccctcgtggtcgaggccccgaccagcccctcgatcacgttcgaggggcttgcaggcgag
gcgacgatccgcgacgacgattccagccagtggcccggcgtctccatctcgtctgccacg
gcgcttgaatggggctattccgggtacctgcgtttcgtcgtatcgctgtcggaagcgtct
gacgtacccgtccagatttcgtaccagaccgaccttggcgatgcgcttcaaagcgacctt
tactacagcgacaataccggcgttctggatttcgcgccgggagagaccagcaagtctgtg
ttcatacgcacagattccgactctcttgatgaacgtgacgaatccgtctttctgcgcctg
acaagctatcaggtgggtgagtcctacgtgaccttcccggacgaccagaacgcgatgacg
gccgtcggcttcattctggatgacgacggcgtcggcccgaaccggatgcttgcggccttg
cccacctccgtccgggaaggcgacagctgcgatcctgttcatttcgtgccggtctatctg
tccagcccggccgccgataccctggttttcgacgtctcggcccagaacggcacggcgacg
gcaggcgtggatttcgaactgctgactgacacggtcacattcctgcccggtcagaccagc
gcggcagtacaggtcgcgattttcggcgaccgggcagaggaaggcaccgaaagcttcacc
ttgtcctttgcgcccgcgaccgacacgcctttcgtcgggacgatacagaaccgaggtgtc
acgatcctcgatatggtcgatgtgccggacgggagttactacggcacgaacggatcggag
tccgtcaccctgacatcgggcaacgatacctattacgcgtatggcgggaacgacaccgta
tccggcggttccggccatgacgttcttcatggctgcgacggcaatgaccgcctgctcggc
ggaagcggcgatgacattctttacggcgaaggcggcatggacacgctgacgggcggtgac
ggctccgatgtgtttcacctgtcgagcaattttccaacgggcacgtcctatcacgacacg
atcacggattttaccggggaggatgtcatccggttccatgacggactcgcccttatctcc
gcgagttcgggcgcagcggaaacgcagcttcactttgacaccgacagcgacggcgccgcg
gatgcaatcctcaccctgcgcggggacttccgagactacgaattccatacccgggcctat
gatgacgacgaggtcgaggcctacctgaacgtccagacaggttcgggcggcgccagcacc
cggggcgatttcaacggcgacggcaccagcgacatcctgtggcgcaagtccgccggtcat
gtcggctacttcgaaatggaaaatggtggtcatacctatcacgccatcggctgggccggc
accgactggtcggtcgaaggcacgggcgacctgaacggcgacggaaccagcgatatcctg
tggcgcaagtccgccggccatgtcggctatttccagatggaaaatggcacccacagctat
cacgccatcggctgggccgggacggattggacggttcagggcctcggcgatctgaacggc
gatggcaccgacgatatcctgtggcgcaagtcggccggccatgtcggctatttcgaaatg
gacaatggcagccacacctaccaggccatcggctgggccggtaccgactggacggtcgtg
ggcatcggcgatctgaacggtgacgggacggatgacatcctgtggcgcaagtcggccggc
catgtcggctatttcgagatggacaatggcagccacacctaccacgcgattggctgggcg
gggacggattggtcggtcgagggtgtgggcgacctgaatggcgacggcaccgacgatatc
ctgtggcgcaaggacactggccatgtcggctatttcgaaatgcatgacgggcaggacacc
tatcacgccatcggctgggctgggacagactggtcggtcgaaggagtcggcgatgtgaac
ggcgatggcaccgacgatgtcatctggcgcaaggacaccggccgtgtcagctattgggaa
atgaacgacggcgacgcgacctatcacgcaatcgccgatgtcggcaccgactggcaaatt
gtataa
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