Rhodovulum sp. P5: RGUI_4344
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Entry
RGUI_4344 CDS
T04813
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhc
Rhodovulum sp. P5
Pathway
rhc03030
DNA replication
rhc03430
Mismatch repair
rhc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGUI_4344
03430 Mismatch repair
RGUI_4344
03440 Homologous recombination
RGUI_4344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhc03032
]
RGUI_4344
03400 DNA repair and recombination proteins [BR:
rhc03400
]
RGUI_4344
Enzymes [BR:
rhc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGUI_4344
DNA replication proteins [BR:
rhc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGUI_4344
DNA repair and recombination proteins [BR:
rhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGUI_4344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ARE42370
LinkDB
All DBs
Position
pRGUI01:complement(131071..131736)
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AA seq
221 aa
AA seq
DB search
MLHRLRKAWLKRRLTAPDYLFLFDEAPPGEYVCFDLETTSLDPETAQILSIGAVRIRDHR
VLASQRLSLRVRAEGDFDSEAIKVHRIRRLDAVRGMPVREALDQLLRFIGPAPLVGYYLE
FDVAVVNRYLKGWIGTSLPQRQIEVSAEYYDWKTRGGVDQHVDLRFDSIRHTLDLPTLPA
HDAINDAMMAAMCFVKLRHQTRSSWRREQEATQRSLADDGA
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccggctgcgcaaagcctggctgaaacggcggctgaccgcgccggactatctg
ttcctgttcgatgaggccccgccgggcgaatatgtctgcttcgatctggaaaccaccagc
cttgacccagagacggcgcagattctgtcgatcggggcggtgcgcatccgtgaccaccgg
gttctggccagtcagcgcctttcgctgcgggtccgggccgagggcgatttcgacagcgag
gcgatcaaggtgcaccgcatccgccggctggatgcggtgcgcggcatgcccgtgcgcgag
gcgctggaccagttgctgcgcttcatcggccccgcgccgctggtgggctattacctcgaa
ttcgacgtggcggtagtgaaccggtatctgaagggatggatcggcacgtccctgccccag
cgccagatcgaggtgtcggcagagtattacgactggaagacccgcggcggggtcgatcag
catgtcgatctgcgttttgacagcatccgacatacgctggatttgcccacgcttcccgcg
catgacgcgatcaatgacgcgatgatggcggcgatgtgtttcgtcaagctgcgccatcag
acgcgatcctcctggcggcgagagcaggaggcaacgcagcgcagtcttgcagacgacggg
gcctga
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