Rhodanobacter denitrificans: R2APBS1_0141
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Entry
R2APBS1_0141 CDS
T02495
Name
(GenBank) TonB-dependent vitamin B12 receptor
KO
K16092
vitamin B12 transporter
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhd02000
]
R2APBS1_0141
Transporters [BR:
rhd02000
]
Other transporters
Pores ion channels [TC:
1
]
R2APBS1_0141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AGG87321
UniProt:
M4NHL6
LinkDB
All DBs
Position
147040..148887
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AA seq
615 aa
AA seq
DB search
MKKTLLAAALLGGTLAAHAADQNAASALAPVIVTATRTAITADQALSSVTVITRADIERL
QPLSVPDLLAGLPGLSFANSGGYGQQTSLFLRGSNSTHTLLLVDGVRVASVSAGLAAFEQ
IPVEQIERIEVVRGPRSSLYGADAIGGVIQIFTRRGTPGGGLQPSFSVTTGSNRLLRGQA
GLSGGDGHAWYNLGVGAQYTRGINACRIGAAEAFAGCFTDEPDRDAFRNKNLSASGGYRW
DNGAELTGTWLRSLGEIHFDGSYQNRSRTLQQVAGSSFSFNPLPAWKTTLSVGQNLDRYD
NYENRDFVGYIYSRRNQAAWQNDLSMADNQLLTLGVDWQGEHIDSDTGFLASRRNNTGGY
VQYQGTFGRHEVQLSARRDHNGQFGDHNTGAAAWGYHFDHGLRLSASYGSAFHAPTFNDL
YYPYGSGNPQLKPEQSRSAELGLSQQQDAWNWALNAYQTRIDQLIALDANYFPSNISKAR
IRGVEGQLGATLAGWQLQGYLTWLQPRNDDGGANDGKWLPRRPGRTARLDLDRRYGAFGV
GASVNAAGRSYDDAANRHPLAGYTTADLRTSWHFAPDWQLEARLANVFDRHYETVWYFNQ
PGRGAFLTLRYSPAR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaccctgctggccgcggcactgctcggcggcacgctggccgcccacgcggcc
gaccagaacgcggcgtcggcgctggcgccggtgatcgtcaccgccacgcgcaccgcgatc
accgccgaccaggcgctgtcgtcggtgacggtgatcacccgcgccgacatcgagcggctg
cagccgctgtcggtgccggacctgctggccggtctgcccggcctgagcttcgccaacagc
ggcggctacggccagcagacctcgctgttcctgcgcggcagcaactccacccacaccctg
ctgctggtcgacggcgtgcgggtggcctcggtcagcgccgggctggcggcgttcgagcag
atcccggtggagcagatcgagcgcatcgaggtggtgcgcggcccgcgttcgagcctgtac
ggcgccgacgcgatcggcggggtgatccagatcttcacccggcgtggtacgccgggcggc
ggcctgcaaccctcgttcagcgtgaccaccggcagcaaccgcctgctgcgcggccaggct
ggactgtccggcggcgatgggcacgcctggtacaacctcggcgtcggcgcccagtacacc
cgtggcatcaacgcgtgccgcatcggcgcggccgaagcgttcgccggctgcttcaccgac
gagccggaccgcgacgccttccgcaacaagaacctcagcgccagtggcggctatcgctgg
gacaatggcgccgagctcaccggcacctggctgcgcagcctcggcgagatccatttcgac
ggcagctaccagaaccgcagccgcaccctgcagcaggttgccggcagcagcttcagcttc
aatccgctcccggcgtggaagaccacgctgagcgtgggccagaacctggaccgctacgac
aactacgagaaccgggacttcgtcggctacatctactcgcggcgcaaccaggcggcgtgg
cagaacgacctcagcatggccgacaaccagctgctgaccctgggtgtcgactggcagggc
gagcacatcgacagcgacaccggcttcctcgccagccgccgcaacaacaccggcggctac
gtgcagtaccagggcacgttcggccgccacgaggtgcagctgtcggcgcggcgcgaccac
aacggccagttcggcgaccacaacaccggcgccgcggcgtggggctaccacttcgatcat
ggcctgcgcctgtcggccagctacggcagtgcgttccatgcgccgaccttcaacgacctg
tactacccgtacggcagcggcaacccgcagctgaagccggagcaatcgcgcagcgccgaa
ctgggcctgagccagcagcaggatgcgtggaactgggcgctgaacgcctaccagacccgc
atcgaccagctgatcgcgctggacgccaactacttcccgtccaacatcagcaaggcgcgc
atccggggcgtggaaggccagctcggcgcgaccctcgccggctggcagctgcagggctac
ctgacctggctgcagccgcgcaacgacgacggcggcgccaacgacggcaagtggctgccg
cgccggcccgggcgcaccgcgcgactggacctggaccggcgctatggtgcgttcggcgtg
ggcgccagcgtcaacgcggccggacgcagctacgacgacgcggccaaccgccacccgctg
gccggctacaccaccgccgacctgcgcaccagctggcacttcgcgccggactggcagctc
gaggcgcggctggccaacgtgttcgaccgccactacgagaccgtgtggtacttcaaccag
cccggccgcggtgcgttcctgaccttgcgctacagcccggcgcgctga
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