Rhodanobacter denitrificans: R2APBS1_0205
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Entry
R2APBS1_0205 CDS
T02495
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_0205
Enzymes [BR:
rhd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
R2APBS1_0205
DNA repair and recombination proteins [BR:
rhd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
R2APBS1_0205
Prokaryotic type
R2APBS1_0205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGG87383
UniProt:
M4ND67
LinkDB
All DBs
Position
complement(237218..238630)
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AA seq
470 aa
AA seq
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MSTALVLFRRDLRLADNPAWSAACAEHAQVLPVFIHSGDEGRWSAGAASRWWLHHSLAAL
ARQLHDASAGLHLRRGEPLDILRALIASSGARAVYWNRLYEPAAIARDTRIKSALRADGI
AVHSHNAALWCEPWAIATQQAAPYKVFTPYWRNLRPRLQPVEPLPAPHVPGWHELPDGLP
LAALELLPRIAWAGGLAARWQPGEAGARELLEIFGDDAIGDYAHARDLPARHGTSRLSPH
LHFGEISPRQIQFELDRRAHATDAKRRPDLEPYLRELGWREFAHHLLYHFPHTPTDNFNP
RFDDFPWAPADHALLERWQRGRTGIPLVDAGMRELWRTGWMHNRVRMIVASFLTKNLRQH
WQHGARWFWDTLVDADLANNTLGWQWVAGCGADAAPYFRVFNPVTQAKKFDPDGIYLRRW
LPELAEAPLALLHEPWRDADLLKRSGYPAPMVELGQSRQQALDAYAALAR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggcgctggtgctgttccggcgcgacctgcgcctggccgacaacccggcgtgg
agtgcggcctgtgcggaacacgcgcaggtgctgccggttttcatccacagcggcgacgaa
ggccggtggtcggccggtgccgccagtcgctggtggctgcaccattcactggccgccctc
gcccggcagctgcacgacgcaagcgccggcctgcacctgcgtcgtggcgaaccgctggat
attctgcgggcgctgatcgcaagcagcggcgcccgtgcggtgtactggaaccggctgtac
gaaccggccgcgatcgcgcgcgacacgcggatcaagagcgcgctgcgggccgacggcatc
gcggtgcacagccacaacgccgcgctgtggtgcgagccgtgggcgatcgccacgcagcag
gctgcgccgtacaaggtgttcacgccgtactggcgcaacctgcgcccgcggctgcagccg
gtcgaaccgctgcccgcgccgcacgtgccgggctggcacgagttgcccgacggcctgcca
ctggccgcgctcgaactgctgccgcggatcgcctgggccggcgggctggccgcccgctgg
caaccgggcgaagccggtgcgcgggagttgctggagatcttcggtgacgacgccatcggc
gactacgcgcacgcgcgcgacctgcccgcgcgccacggcacttcgcgcctgtcgccgcac
ctgcacttcggcgaaatctcgccgcgacagatccaattcgaactcgatcgtcgcgcccat
gccaccgacgccaaacgccgccccgacctcgaaccctatctgcgcgaactgggctggcgc
gaattcgcccatcacctgctgtatcactttccacacacgccgaccgacaacttcaatccg
cgcttcgacgatttcccgtgggcgcccgcggaccacgcactgctcgaacgctggcagcgc
ggccgcaccggcatcccgctggtcgacgccggcatgcgcgagctgtggcgcaccggctgg
atgcacaaccgcgtgcgcatgatcgtggccagcttcctgaccaagaacctgcgccagcac
tggcagcacggcgcgcgctggttctgggacaccctggtcgacgcggacctcgccaacaat
acgctgggctggcaatgggtggccggctgcggcgcggatgccgcgccgtacttccgcgtg
ttcaatccggtgacgcaggcgaagaagttcgatccggatggcatctatctgcggcgctgg
ttgccggagctggcggaggcgccgttggcattgctgcatgagccgtggagggatgccgac
ctgctcaagcgcagcgggtatccggcgccgatggtggagttggggcagtcacgccagcaa
gcgctggatgcctacgccgcgctcgcacgctga
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