Rhodanobacter denitrificans: R2APBS1_0213
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Entry
R2APBS1_0213 CDS
T02495
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00020
Citrate cycle (TCA cycle)
rhd00190
Oxidative phosphorylation
rhd00650
Butanoate metabolism
rhd00720
Other carbon fixation pathways
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
rhd01120
Microbial metabolism in diverse environments
rhd01200
Carbon metabolism
Module
rhd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhd_M00149
Succinate dehydrogenase, prokaryotes
rhd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
R2APBS1_0213
00650 Butanoate metabolism
R2APBS1_0213
09102 Energy metabolism
00190 Oxidative phosphorylation
R2APBS1_0213
00720 Other carbon fixation pathways
R2APBS1_0213
Enzymes [BR:
rhd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
R2APBS1_0213
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
FAD_binding_3
HI0933_like
Lycopene_cycl
Thi4
ThiF
Motif
Other DBs
NCBI-ProteinID:
AGG87390
UniProt:
M4NAB3
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All DBs
Position
complement(245426..247222)
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AA seq
598 aa
AA seq
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MPAEAYKVEKHQYDVVIVGAGGAGLRVALGLAAAGLSVACVTKVFPTRSHTVAAQGGIAA
ALGNMGEDDWRYHFYDTVKGGDWLGDQDAIEYMCREAIPAVIELEHFGVPFSRTEDGHIY
QRPFGGHTVRHGEALAQRSCAAADRTGHAILHTLYTQALKHKVKFFVEYFVTDLVTDPRT
GDVAGALAINLTEGSVHFFRGHAVILATGGYGRTYFSSTSAHTCTGDGGGMALRAGVALQ
DLEFVQFHPTGIYGSGCLITEGVRGEGGYLTNADGERFMERYAPHVKDLASRDVVSRAIT
VEIREGRGVGEHKDHVLLNLAHLGSDTLHERLPGISETARIFAGVDVTKEPIPVLPTAHY
CMGGIPTNMYGQVVQKVGSDNDHIMPGLFAIGEAACVSVHGANRLGTNSLLDLIVFGRAA
AQRCAELIKPNTPFAGLPTDALDPALARLDKVRHAKGGTPTAQLREKMQRTMQNDAAVFR
TAETLQQGCERIDAIYAQFEDVHVSDPSLIWNSDLIESFELDNLLVQAVGTMHSAAARPE
TRGAHARDDFPERDDVNWMKHTLVKVDDKGRCTLDYRPVHMQPLDDEVETIPPAKRVY
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgaagcgtacaaggttgaaaagcatcaatacgacgtggtgattgtcggcgcg
ggcggcgccggcctgcgcgtagcgctgggcctggctgcggccgggctgtcggtagcctgc
gtaaccaaggtgtttcccacccgttcacatacggtggctgcccagggcggcattgccgcg
gccctcggcaacatgggcgaagatgattggcgctatcacttctacgacaccgtcaagggc
ggcgattggctgggcgatcaggacgccatcgagtacatgtgccgcgaagcgattcctgcc
gtcatcgagttggaacactttggcgtgccgttctcgcgcaccgaagacgggcacatttac
cagcgcccgtttggcggtcacacggttcgccacggcgaagcgctggcgcaacgcagctgc
gcagcggccgaccgtaccggccacgccattttgcacaccctgtacacgcaggcgttgaag
cacaaagtcaaattctttgtcgaatattttgttaccgatctggtgaccgatccgcgcacc
ggcgacgttgccggtgcgctggccatcaacctcaccgaaggcagcgtgcactttttccgc
ggccatgcggtcatcctggcaactggcggctacggacgcacgtacttttcctccacctcg
gcacatacctgcacgggcgatggcggcggcatggcgctacgtgccggagtggccctgcag
gatctggaattcgtgcaattccaccctaccggcatttacggttccggctgcctgattacc
gaaggcgtgcgtggcgaaggtggttatctcaccaacgccgacggcgagcggttcatggag
cgctacgcgccgcacgtgaaggatctggcttcacgcgacgtcgtcagccgcgccatcacg
gtcgaaatccgggaaggccgcggcgtgggcgaacacaaggatcacgtgctgctgaacctg
gcgcatctgggcagcgacacgctgcacgaacgtctgccgggcatttccgaaaccgcgcgc
attttcgccggcgtggatgtgaccaaggagcccattccggtgctaccgaccgcgcattac
tgcatgggcggcatacccaccaacatgtacggccaggtggtgcaaaaagtgggttcggac
aacgaccacatcatgccgggcctgttcgccatcggcgaagcggcgtgtgtatcggtacac
ggcgccaaccgcctgggcacgaactcgctgctcgatttgatcgtgtttggccgcgctgcc
gcgcagcgctgcgccgagctcatcaagccgaacacgccctttgccggattgccgaccgac
gcgttggatccggcgctggcccggcttgacaaggtgcgtcacgccaaaggcggtacgccc
acggcacagctgcgcgaaaaaatgcagcgcaccatgcaaaacgacgcggcggtcttccgc
acggccgaaacgctccagcagggttgcgagcggattgacgcgatctacgcccagttcgag
gacgtgcacgtgtccgatccgtccctgatctggaactccgacctcattgaaagcttcgag
ctcgacaacctgctggtgcaagccgtaggcaccatgcattcagcggcggcgcggccggaa
acccgcggcgcccacgcgcgtgacgactttcccgagcgcgacgacgtcaactggatgaag
cacaccctcgtcaaagtcgatgacaagggccgatgcacgctcgactaccggccggtacac
atgcagccgctcgacgacgaggtggaaaccatcccgccggccaaacgcgtgtactga
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