Rhodanobacter denitrificans: R2APBS1_0289
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Entry
R2APBS1_0289 CDS
T02495
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R2APBS1_0289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhd03032
]
R2APBS1_0289
Enzymes [BR:
rhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
R2APBS1_0289
DNA replication proteins [BR:
rhd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
R2APBS1_0289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_DnaG
DNAG_N
DnaG_DnaB_bind
Toprim_2
Toprim_4
DnaB_bind
Toprim
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
AGG87465
UniProt:
M4NAG2
LinkDB
All DBs
Position
complement(334613..336400)
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AA seq
595 aa
AA seq
DB search
MRGLIPDSFIDELLARVDIVDVIERRVPLKKAGREWTACCPFHNERTPSFYVSPAKQFFH
CFGCGAHGSAVKFLMDYERLEFPDAVEELAQTVGLTVPREGGREAAPREDKTDLYALLDA
AAAWYEGELPRNADAQAYCRKRGLDAETIRRFRLGWAPAGYDGVIKALGNTPRRMELLNE
AGMVASSERGSKYDRFRERLMFPILDRRDRVIAFGGRIIERSGEGSPAPDARTQDARKSD
GPKYLNSPETPLFHKGRELFALWQVKQANPTLARIVVVEGYMDVIALHQAGLPIAVATLG
TATTPEHTEVLFRAAPDVVFCFDGDRAGRAAAWKALESALPRLRDGRQAYFLFLPDGEDP
DSLVRKEGKAGFEQRIRDAMPLSDYFFNELSHDVDMASLDGRARLAERARPLIAKLPDGA
FRDLMAQELEKRSGARAVLQADPAAHRAMQRPTAVQRSLVRSAISLLLAQPGMADQVEKP
YRFLRLDKPGVELLAELLDLARARPGINSAMLVEHFAERPEYPSLQKLMAALAVGELEAQ
RSEFFDALARMEDQAITQRRDALTAKSREAALDPSEKTELRELLAARVRPPVASA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcctgattcccgacagcttcatcgacgaactgcttgcccgcgtcgacatcgtc
gacgtgatcgagcggcgcgtgccgctgaagaaggccgggcgcgagtggaccgcgtgctgc
ccgttccacaacgagcgtacgccgtcgttctatgtcagcccggccaagcagttcttccac
tgcttcggctgcggtgcacacggcagcgcggtgaagttcctgatggactacgagcggctg
gagtttccggacgcggtggaggaactggcgcagacggtgggcctgaccgtgccgcgcgag
ggcggccgcgaggcggcgccgcgcgaggacaagaccgacctttacgcgctgctcgacgcc
gccgcggcctggtacgagggcgagctgccgcgcaatgccgacgcccaggcgtactgcagg
aagcgcgggctggacgcggagacgatccggcgcttccgcctcggctgggcgccggccggc
tacgacggtgtgatcaaggcgctgggcaacacgccgcggcggatggagctgctgaacgag
gccggcatggtcgcctcgagcgagcgcggcagcaagtacgaccgtttccgcgaacggctg
atgtttccgatcctcgatcgccgcgaccgcgtcatcgcgttcggcgggcggattatcgaa
cggtccggcgagggatcgccggcgcctgatgctcgcacgcaggacgcgcgcaaaagcgac
ggccccaagtacctcaactcgccggaaaccccgctgttccacaagggccgcgagctgttc
gcgctgtggcaggtgaagcaggccaacccgacgctggctcgcatcgtggtggtcgagggc
tatatggacgtgatcgcactgcaccaggccgggctgccgattgcggtagccacgctgggc
acggcgaccacgcccgagcacaccgaggtgctgttccgcgccgcgccggacgtggtgttc
tgcttcgatggcgaccgcgccggccgcgcggcggcgtggaaggcactggaatccgcgctg
ccgcggctgcgcgacggccgccaggcgtacttcctgttcctgcccgacggcgaggatccg
gattcgctggtgcgcaaggaaggcaaggccggcttcgagcaacgcatcagggacgcgatg
ccgctgtcggactatttcttcaatgaactgtcgcacgacgtcgacatggccagcctcgac
ggccgcgcccggctggccgagcgcgcgcgcccgctgatcgcgaaactgcccgacggcgcg
ttccgcgacctgatggcgcaggagctggagaagcgcagcggtgcccgcgcggtgctgcag
gccgaccccgccgcccaccgcgccatgcagcgacccacggcagtgcagcgcagcctggtg
cgcagcgcgatctcgctgctgctggcgcagccgggcatggccgaccaggtggagaagccc
taccgcttcctgcgcctggacaagcccggcgtggaactgctggccgaactgctcgacctc
gcacgcgcgcgtcccggcatcaactccgcgatgctggtggagcacttcgccgagcggccg
gaatacccttcgctgcagaagctgatggcggcgctggcggtgggcgagctggaggcgcag
cgcagcgaattcttcgatgcgctggcgcggatggaagaccaggccatcacccagcgccgc
gatgcactcaccgcgaagagccgcgaggcggcgctggacccctccgagaagacggagttg
cgcgagctgctggctgcccgcgtgcggccgccggtggcctcggcctga
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