Rhodanobacter denitrificans: R2APBS1_0398
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Entry
R2APBS1_0398 CDS
T02495
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00550
Peptidoglycan biosynthesis
rhd01100
Metabolic pathways
rhd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R2APBS1_0398
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R2APBS1_0398
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhd01011
]
R2APBS1_0398
Enzymes [BR:
rhd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
R2APBS1_0398
Peptidoglycan biosynthesis and degradation proteins [BR:
rhd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
R2APBS1_0398
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AGG87569
UniProt:
M4NAN9
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All DBs
Position
445652..447658
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AA seq
668 aa
AA seq
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MKPRRSIKDPRGESLLFRRRALAGFVLIVLCLCLLVGRFVFLQVLHHDEFVTRSQANRVK
PRAIPPARGLIYDRNGVLLADNVPAFRLEVVPEQVKDMPALLERLGQVVPLDQDDLDAFR
KQLRQSRRFESVPLKLRLSEDEIARFAVNRWRFPGVDVVPYLTRRYPFGGLFAHVVGYVG
RIDADDLERLDPQRYQGTSHVGRSGIERSYENILHGTPGYELLEVNADGRTQRVLETHAP
TPGRNLYLSLDVRLQKAAEAAFDGRPGAAVAIDPRNGQVLAMVSVPSFDPNLFVNGISQA
DYAALTNDPDKPLYNRALRGVYPPGSTVKPLIGLAGLETGMRTPQDSVVSTGVFYIPGQQ
RGYRDDQRGGVGRVDLVGAIEQSVNTYFYKLALDMGIDRLSEYMGKFGFGRPTGIDLIGE
SSGVLPSREWKAANLRQPWYPGETVIAGIGQGFWAVTPLQLSHAIATFAGHGIPYAPRVV
MATQDGVNAKPQALANPPSGPSLIRKPSDWDVVNQGMQQVIYGARGTGRKLGVGFPYLMA
GKSGTAERFSRTSEAYDTNRNTAYLATRHRAWFVAYAPADNPQVAVAAILESGAWGAEAA
GPIVRAILDTWLAGRGGVIADAKRLPVSVAPLAPAAVPAGNVSPDAGVEDSEPLEDLPAQ
ATSSGGTP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccccggcgttcgatcaaggacccccgcggcgaaagcctgctgttccggcgtcgc
gcgctggccggcttcgtgctgatcgtactgtgcctgtgcctgctcgtcggccgcttcgtg
ttcctgcaggtgctgcatcacgacgagttcgtcacccgttcgcaggccaaccgggtcaag
ccacgcgcgatcccgccggcacgcgggctgatctacgaccgcaacggcgtgctgctggcc
gacaacgtgccggcgttccggctggaagtggtgcccgaacaggtcaaggacatgccggcg
ctgctggagcggctgggccaggtggtgccgctggaccaggacgacctggacgcgttccgc
aagcagctcaggcagagccggcgcttcgagagcgtgccgctgaagctgcgcctgagcgaa
gacgagatcgcccgcttcgcggtgaaccgctggcgctttcccggcgtggacgtggtgccc
tacctgacccggcgctatcccttcggcgggctgttcgcgcacgtggtgggctatgtcggg
cgcatcgatgcggacgacctggaacggctcgatccgcagcgctaccagggcaccagccac
gtcggccgcagcggcatcgagcgctcctacgagaacatcctgcacggcacgccgggctac
gagctgctggaagtgaatgccgacgggcgcacccagcgcgtgctggaaacacacgcgccc
acgcccggcaggaacctctacctgagcctcgacgtgcgcctgcagaaggccgccgaggcg
gcgttcgacggccgccccggtgcggcggtggcgatcgatccgcgcaacggccaggtgctg
gcgatggtcagcgtgcccagcttcgatcccaacctgttcgtcaacggcatcagccaggcc
gactacgccgcgctgaccaacgaccccgacaagccgctgtacaaccgcgccctgcgcggc
gtgtacccgcccggctccacggtgaagccgctgatcggcctggccgggctggagaccggc
atgcgcacgccgcaggacagcgtggtctccaccggcgtgttctacattcccggccagcag
cgcggctaccgcgacgaccagcgcggcggcgtggggcgggtcgatctggtcggcgccatc
gagcagtcggtgaacacgtatttctacaagctcgcgctggacatgggcatcgaccggctc
agcgaatacatgggcaagttcggcttcggccggccgaccgggatcgacctgatcggcgag
tcgtccggcgtgctgccctcgcgcgagtggaaggcggcgaacctcaggcagccgtggtat
cccggcgagacggtgatcgccggcatcggccagggtttctgggcggtcaccccgctgcag
ctgagccatgcgatcgccaccttcgccggccacggcatcccgtacgcgccgcgcgtggtg
atggccacccaggacggcgtcaacgcgaagccgcaggcactggccaatccgcccagcgga
ccgtcgctgatccgcaagccgtccgactgggacgtggtgaaccagggcatgcagcaggtg
atctacggcgcccggggcaccggccgcaagctgggcgtcggcttcccgtacctgatggcc
ggcaagagcggcactgccgagcgattctcgcgtacctccgaggcctatgacaccaatcgc
aacacggcctatctggccacccgccaccgcgcctggttcgttgcctacgcgccggccgac
aacccgcaggtcgcggtggcggcgatcctcgaatccggtgcctggggcgcggaggcagcc
ggaccgatcgtgcgcgcgattctcgatacctggctggccgggcgcggtggcgtgattgcc
gacgcgaaacgcctgccggtgtcggtcgcgccgttggcgccggctgccgtgccggccggg
aacgtttcgcccgacgccggcgtggaagacagcgagccgctcgaggatctgccggcgcag
gcgacgagcagcgggggcacgccatga
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