Rhodanobacter denitrificans: R2APBS1_0414
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Entry
R2APBS1_0414 CDS
T02495
Name
(GenBank) periplasmic serine protease, Do/DeqQ family
KO
K04772
serine protease DegQ [EC:3.4.21.-]
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhd01002
]
R2APBS1_0414
Peptidases and inhibitors [BR:
rhd01002
]
Serine peptidases
Family S1: chymotrypsin family
R2APBS1_0414
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_6
Trypsin
PDZ_2
PDZ
LSM
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
AGG87585
UniProt:
M4NAL9
LinkDB
All DBs
Position
complement(468584..469990)
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AA seq
468 aa
AA seq
DB search
MSQPPSRRVPWLTGLLAVAVAMLGSVPGAGRAATLPAAVGGQPMPSLAPMLTRVTPAVVN
ISTTTRVQVRDAYFDDPMVRQFFGLPATPRERVEQSLGSGVIVDAAKGYVLTNNHVVGGA
DDISVTLQDGRTFRGKLLGTDPATDVAVVQIPAQNLKALPLADSSALQVGDYVVAVGDPF
GLGQTVTAGIVSALGRSGLGQNSSSTGGYQNFIQTDASINPGNSGGALVNLRGELVGINT
MIFSPSGGNVGIGFAIPSNLTSEVMAQLLAHGKVQRGSLGVQTQAITPRIARLLSLKDSN
GVVVTGVADGSAAAHAGLQPGDVLTSLNGKPLHSVQELNNAEGLLPLGSTLRLGVLREGK
LREVSATLTAEKLASVDGGQLDPRLAGVRFSELSQSQRNQGWYGAAVDAVQPGSRAARAG
LDAGDVVIGVGGQRITSLHMLRGLAGVNPRQLVLVVADDDGTRYVVVN
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccgccttcccgtcgtgtgccctggctgaccggcctgctggccgtggccgtc
gccatgctcggcagcgtgccgggcgccggtcgcgcggccaccctgccggccgcggtcggc
ggccagccgatgccgtcgctggcgccgatgctgacgcgggtgacgccggcggtggtgaac
atctccaccaccacgcgggtgcaggtgcgcgacgcgtatttcgacgacccgatggtgcgc
cagttcttcggcctgccggcgacgccgcgcgagcgggtcgagcagagtctgggctccggc
gtgatcgtggacgcggcgaaaggctacgtgctgaccaacaaccatgtggtcggcggcgcc
gacgacatcagcgtgacgctgcaggacgggcgcacgttcaggggcaagctgctcggcacc
gatccggccaccgacgtggcggtggtgcagatcccggcgcagaacctgaaggcgctgccg
ctggccgactcctccgcgttgcaggtgggcgactacgtggtggcggtgggcgacccgttc
gggctgggccagacggtcaccgccggcatcgtctcggcgctgggccgctcggggctgggt
cagaactcatcgagcacgggcggttaccagaacttcatccagaccgacgcctcgatcaac
cccggcaactccggcggcgcgctggtcaacctgcgcggcgagctggtcggcatcaacacc
atgatcttctcgccgtccggcggcaacgtgggcatcggcttcgcgattcccagcaacctc
accagcgaggtgatggcgcagctgctggcgcacggcaaggtgcagcgcggcagcctgggc
gtacagacccaggcgatcaccccccgcatcgcccgcttgctgagcctgaaagacagcaac
ggcgtggtggtcaccggcgtggccgacggctcggccgctgcgcacgccggcctgcagccc
ggcgacgtgctgacctcgctgaacggcaagccgctgcacagcgtgcaggaactgaacaat
gccgagggcctgttgccgctgggcagcacgctgcgtctgggcgtgctgcgcgagggcaag
ctgcgcgaggtcagcgccacgctcaccgcggagaaactggccagcgtcgacggcggccag
ctcgacccgcgcctggccggcgtccgcttcagcgaactcagccagagccaacgcaaccag
ggctggtacggcgcggcagtcgacgcggtgcagccgggcagccgcgcggcacgcgccggg
ctggacgccggcgacgtggtgatcggcgtgggcggccagcgcatcaccagcctgcacatg
ctgcgcggcttggccggagtgaacccgcgccagctggtgctggtggtcgccgacgacgac
ggcacgcgctacgtggtggtcaactag
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