Rhodanobacter denitrificans: R2APBS1_0575
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Entry
R2APBS1_0575 CDS
T02495
Name
(GenBank) cystathionine beta-lyase/cystathionine gamma-synthase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00260
Glycine, serine and threonine metabolism
rhd00270
Cysteine and methionine metabolism
rhd00450
Selenocompound metabolism
rhd00670
One carbon pool by folate
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
rhd01230
Biosynthesis of amino acids
Module
rhd_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R2APBS1_0575
00270 Cysteine and methionine metabolism
R2APBS1_0575
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
R2APBS1_0575
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
R2APBS1_0575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhd04147
]
R2APBS1_0575
Enzymes [BR:
rhd01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
R2APBS1_0575
Exosome [BR:
rhd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
R2APBS1_0575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Met_gamma_lyase
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AGG87744
UniProt:
M4NB14
LinkDB
All DBs
Position
630960..632126
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AA seq
388 aa
AA seq
DB search
MPKKMPAAHHGLGTRAIHAGQHPDPSTGAIMTPIYATSTYVQESPGKHKGYEYSRTQNPT
RMAYERCVADLEGGVAGFAFASGLAAAATVLDLLDSGSHMIAMDDLYGGTYRLFERVRRR
SAGLDFSFIDLNDMAALKAALKPNTRMIWAETPTNPMLKLVDLAKVAAFAKKHGLILVVD
NTFCSPMVQRPLEYGADLVLHSATKYINGHSDMVGGIVVANDQELAGQMAFLQNSVGAVA
GPFDAFLAMRGLKTLHLRMRQHCASALELATWLQKHPAVERVIYPGLKSHPQHALAKRQM
HGFGGIVTIEVKGGLKKAKRMLERCELFALAESLGGVESLIEHPAIMTHASVPAANRKRL
GISDGLVRLSVGVEDVSDLRNELGHVLG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaagatgcctgccgcccaccacggactcggaacgcgcgcgatccacgccggc
cagcatcccgatccgtccaccggcgccatcatgacgccgatctacgccacctcgacctac
gtgcaggagagccctggcaagcacaagggctacgagtattcgcgcacgcaaaatcctacg
cgcatggcctacgaacgctgcgtggcggacctggaaggcggcgtggccggtttcgcgttc
gcctccggcctggctgccgcggcgaccgtgctggacctgctcgactcgggcagccacatg
atcgcgatggatgacctgtacggcggcacctaccgcctgttcgagagggtgcgccggcgc
tcggccgggctcgacttcagctttatcgacctgaacgacatggcggcgctgaaggcggca
ctgaagccgaacacgcggatgatctgggcggagacgccgaccaacccgatgctgaagctg
gtcgacctggccaaggtcgccgcgttcgcgaagaagcacggcctgatcctggtggtcgac
aacaccttctgctcgccgatggtgcagcgaccgctggaatacggcgcggacctggtgctg
cattcggccaccaagtacatcaacggccattccgacatggtcggcggcatcgtggtcgcc
aacgatcaggaactggccggacagatggctttcctgcagaactcggtcggcgcggtggcc
ggcccgttcgatgccttcctcgccatgcgcggcctgaagaccctgcacctgcgcatgcgc
cagcactgcgccagcgcgctggagctggccacgtggctgcagaagcacccggcggtcgag
cgggtgatctaccccggcctgaagagccacccgcagcacgcactggccaagcgtcagatg
cacggcttcggaggcattgtcaccatcgaggtgaagggcggcctgaagaaggccaagcgc
atgctggaacgctgcgagctattcgcgttggccgaatcgctcggcggtgtcgagagcctg
atcgagcatccggcgatcatgacccacgcctcggtgcccgcggccaaccgcaagcggctg
gggatcagcgatgggctggtgcggctgtcagtgggggtagaagatgtcagcgatttgcgc
aatgagttgggacatgtacttggctga
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