Rhodanobacter denitrificans: R2APBS1_0726
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Entry
R2APBS1_0726 CDS
T02495
Name
(GenBank) Tfp pilus assembly protein, tip-associated adhesin PilY1
KO
K02674
type IV pilus assembly protein PilY1
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhd02044
]
R2APBS1_0726
02035 Bacterial motility proteins [BR:
rhd02035
]
R2APBS1_0726
Secretion system [BR:
rhd02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
R2APBS1_0726
Bacterial motility proteins [BR:
rhd02035
]
Pilus system
Pilus assembly proteins
R2APBS1_0726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
AGG87893
UniProt:
M4NEF1
LinkDB
All DBs
Position
complement(812923..816237)
Genome browser
AA seq
1104 aa
AA seq
DB search
MSHARSNLNRRLRIFALIAAALTLPGMASGEDIDLYTGNAINGGQPNVLLVMDNAANGNS
ATTIAPGSNCPTWIASNPKAHDFEACALYNMIGSIGAPTSALNGQVNMGLMMFNGANGGL
FFYPNPSPTPPGPLPLLDTTRAATFQSAIAGTPGGGTGPGTAAVSTNSNNLDESMEEAWA
FFTGTTGLSGTKYTTPINNACQKNFVIYLANVSGSNAPKTANSVTPAQTTLATAMGVPAS
TNPMSPPMIPLNPTGDQQNWGDEWAKFMYQSDLSGISASVEHNPQNIITYTIAVSNGCEA
TQQKCKDHINLIKSMAANGGGKYFYVSAGDVSGLIEALTTILNEVQATNSVFASVSLPVA
VNAQGTSLNQVYVGMFRPDATAAPRWAGNLKQYQLGYDSNNDVVLDDSLGNPAISNAGTG
FISPTALSFWTADHQTGTPRDGPFTITASGYSSSIVASWPANGFWVNHSTGAGGVFDAPD
GEVVDKGGVAAMIRADYLTDQSTRVIYTCTSVGGCPTSGTLPTFDATTLAGNSLFGTSST
TTPTTTDLINWIRGTDNNTGTGAESPAGPGSPVTVRPSVHGDVLHSRPAVVNYGGSIGIV
AFYGSNDGLFHAVNGNKDATAPGVIKMTSGRLVRPGGELWSFIAPNFFSRFQRLYNNSPL
LTLGAASGSGKPYFFDGTTTVYQDLRNAASPKTYIYVTARRGGRLIYAFDVSDPLQPPIF
LWSKTNADIPELGQTWSQPKLALVKGHTDLSSGNPIPVVVMGGGYDTAEDTDPVATADTM
GRAIVVLDAFNGSTVWSACPSGCTAAVPGMTYAIPSDITLLDRNGDGYTDRLYTGDLGGN
IWRVDVDDTSPANWQVTKLASLRTTGTGTGSACATNPTGARKFFYPPDVTPTSSFDAVVA
ASGDREHPLATNASSCVVNRFYMLKDTNTGTSVATGWTTITQAMLTNETGAAAGTTPPYS
STSTTSGFYVTLTHSGEKAVNAPLTVAGYTYFGTNTPADPKLNPSMCYPNLGIARGYAID
FRTGAGQNSNGYIVFDGGGLPPSPVFGLVEVNPGSGVYTPVLIGGGNQTGTGGGNNSSAL
GAQKVTPPNTGKRKRTYWFTEGLR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgcacgctccaacctgaaccgccgattgcgcatcttcgccctgatcgccgcg
gcgctgacgctgccaggcatggccagcggcgaggacatcgacctgtacaccggcaacgcg
atcaatggcgggcagccgaacgtgctgctggtcatggacaacgcggcgaacggcaattcc
gccaccacgatagcccccggcagcaactgccccacctggatcgcctccaatcccaaggcg
catgactttgaggcatgcgcgctttacaacatgatcggctccatcggggctccgaccagc
gcgctgaacggccaggtcaacatgggcttgatgatgttcaacggggccaatggcgggttg
ttcttctatccgaacccctcgccgacgccgcccggccccctgcccctgctggacaccacc
cgtgccgccaccttccagagcgcgatcgccggcacgcccggcggcggaaccggccccggt
acggcggccgtcagtaccaactcgaacaatctcgacgaatcgatggaggaggcctgggct
ttcttcaccggcaccaccggcctgtcggggaccaagtacaccacgccgatcaacaacgcc
tgtcagaagaatttcgtcatctacctggccaatgtgagcggcagcaatgcccccaagacc
gccaacagcgtcacgccggcacaaacgacgctggccacggccatgggcgtccccgccagc
accaaccccatgtcgccgccgatgattccgctgaacccgacgggtgaccagcagaactgg
ggcgacgaatgggcgaagttcatgtaccagtccgacctgtccggtatttccgcctcggtc
gagcacaacccgcagaacatcatcacctacaccattgccgtttcgaatggctgcgaggcc
acgcagcaaaaatgcaaagaccacatcaacctgatcaagagcatggctgccaatggcggc
ggcaagtacttctacgtgagcgcaggtgatgtgagcggcctgatcgaggcactgaccacg
atcctcaacgaagtgcaggcgaccaacagcgtattcgcctcggtgagcctgccggtcgcc
gtgaacgcccaaggtacctcgctcaaccaggtttatgtcggcatgttccgtccggatgcc
accgccgcgccgcgctgggcgggcaacctcaagcagtaccagctcggctacgacagcaac
aacgacgtggtgctggacgactcgctgggcaacccggcgatcagcaacgccggcaccggc
ttcatttcacccaccgcgctcagcttctggaccgcagaccaccagaccggtaccccgcgc
gacggcccgttcaccatcaccgccagcggctatagcagcagcatcgtcgccagctggcca
gccaatggtttctgggtcaaccactcgacgggcgcgggcggcgtcttcgatgccccggat
ggcgaggtcgtcgacaagggcggcgtggccgcaatgatccgcgcggactacctcaccgac
cagtcgacgcgggtgatctacacctgcaccagcgtgggcggctgccccacctccggcacg
ctgcccacgttcgacgccaccacgctggccggcaacagcctgttcggcaccagctcgacc
acgacccccaccaccaccgacctgatcaactggatccgcggcacggacaacaacaccggt
accggtgccgagagcccggccgggccgggcagcccggtcaccgttcggccgtccgtccac
ggcgacgtgctgcattcgcggccggcggtcgtcaactacggcggctccatcggcatcgtg
gcgttctacggttccaacgacggcctcttccacgccgtcaacggcaacaaggatgccacc
gcgcccggcgtcatcaagatgaccagcggacgactggtgcgcccaggcggcgaactgtgg
tcgttcatcgcccccaatttcttcagcagattccagcgcctgtacaacaacagcccgctg
cttacgctgggcgccgccagcggcagcggcaagccctacttcttcgacggcaccaccacg
gtctatcaggacctgcgcaacgccgccagcccgaagacctacatctacgtcacggcgcgc
cgcggcggccggctgatctacgcgttcgacgtgagcgacccgctccagccaccgattttc
ttgtggagcaagaccaacgccgacatccccgaactcggccagacctggtcgcaacccaag
ctggcgctggtcaagggccacactgacctcagcagcggcaatcccatcccggtggtcgtc
atgggcggtggctacgacaccgccgaggatacggatccggtcgccacagccgacaccatg
gggcgcgcgatcgtggtgctggatgcgttcaacggcagcacggtgtggagcgcctgccca
tccggctgcacggctgcggtacctggcatgacctatgcgatcccgtccgacatcaccctg
ctcgatcgcaacggcgacggctacaccgaccgcctctacaccggcgacctcgggggcaac
atctggcgcgtcgacgtggacgacacttcccccgccaactggcaggtgaccaagcttgcc
agcctgcgcaccaccggcaccggcaccggcagcgcctgcgccaccaaccccaccggcgcg
cgcaagttcttctacccccccgatgtcacgccgacctccagcttcgacgcggtggtggcc
gccagcggcgaccgcgagcatcctctggcgaccaacgcatcctcctgcgtggtcaaccgc
ttctacatgctgaaggacaccaacaccggcaccagcgtggccaccggctggaccacgatc
acccaagccatgctcaccaacgagaccggcgccgccgccggaacgaccccgccgtactcc
tccaccagcaccacctcagggttctatgtcaccctgacccactcgggcgagaaggcggtg
aacgcgccgctgaccgtggccggctacacctacttcggcaccaacaccccggccgatccg
aagctgaaccccagcatgtgctacccgaacctgggtatcgcacgcggctacgcgatcgac
ttccggaccggcgccggccagaacagcaacggctacatcgtcttcgacggtggcggcctg
ccgccctcgccggtgttcggcctggtcgaagtcaatcccggcagcggcgtgtacaccccg
gtgctcatcggcggcggtaaccagaccggcaccggcggcggcaacaacagctcggcgctg
ggcgcccagaaggtcactccgcccaataccggcaagcgcaagcgcacctactggttcacc
gaaggcctgagatag
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