Rhodanobacter denitrificans: R2APBS1_0770
Help
Entry
R2APBS1_0770 CDS
T02495
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00260
Glycine, serine and threonine metabolism
rhd00460
Cyanoamino acid metabolism
rhd00630
Glyoxylate and dicarboxylate metabolism
rhd00670
One carbon pool by folate
rhd00680
Methane metabolism
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
rhd01120
Microbial metabolism in diverse environments
rhd01200
Carbon metabolism
rhd01230
Biosynthesis of amino acids
rhd01240
Biosynthesis of cofactors
rhd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R2APBS1_0770
09102 Energy metabolism
00680 Methane metabolism
R2APBS1_0770
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R2APBS1_0770
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
R2APBS1_0770
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
R2APBS1_0770
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
R2APBS1_0770
Enzymes [BR:
rhd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
R2APBS1_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
AGG87935
UniProt:
M4NBC0
LinkDB
All DBs
Position
857943..859196
Genome browser
AA seq
417 aa
AA seq
DB search
MFPKDCTIAGYDDELAKAIADEGRRQEDHVELIASENYASPRVMEAQGSKLTNKYAEGYP
GKRYYGGCEYVDVAETLAIERLKQLFDCDYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNISGKLFNAVQYGVDGNGLIDYDEVQRLATEHRPKMLVGGFSAYSQV
VDWARMRRIADSVGALFFVDMAHVAGLVAAGVYPSPLPHAHVVTSTTHKTLRGPRGGIIV
AKGAGEEIEKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFTTYQTQVVKNAKAMAK
TFIARGYKIVSGGTENHLMLVDLIGREVTGKAAEEALGKAHITVNKNAVPNDPRKPFVTS
GLRVGTPAVTTRGYREADVTELANWICDVLDAPADEAVIARVRGNVTAQCQKFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttccccaaggactgcacgattgccggttacgacgacgaactggccaaggccatcgcc
gatgaaggccggcgccaggaggatcacgtcgagctgatcgcctcggagaactatgccagc
ccgcgggtgatggaagcgcagggctccaagctgaccaacaagtacgccgagggctacccg
ggcaagcgctactacggcggctgcgaatacgtggacgtcgccgagacgctggcgatcgag
cggctgaagcagctgttcgactgcgactacgccaacgtgcagccgcactccggctcgcag
gcgaaccaggcggtgtatctggcgctactgcagccgggtgacaccatcctgggcatgtcg
ctcgcccatggcggccatctcacccacggcgccaaggtcaacatcagcggcaagctgttc
aacgcggtgcagtacggcgtcgacgggaacggcctgatcgactacgacgaagtgcaacgc
ctggccaccgagcaccggccgaagatgctggtcggcggcttcagcgcctactcgcaggtg
gtcgactgggcgcgcatgcgccggatcgccgattcggtcggcgcgctgttcttcgtcgac
atggcccacgtcgccggcctggtcgccgccggcgtgtaccccagcccgctgccgcacgcg
cacgtggtcacctcgaccacccacaagacgctgcgcggcccgcgcggcggcatcatcgtg
gcgaagggggcgggcgaggagatcgagaagaagctgcagtcgatcgtgttccccggtatc
cagggtggcccgctgatgcacgtgatcgcggccaaggcggtggcgttcaaggaagcgctg
gagcccgcgttcaccacctaccagacccaggtggtgaagaacgccaaggcgatggcgaag
accttcatcgcgcgcggctacaagatcgtctccggcggcaccgagaaccacctgatgctg
gtcgacctgatcggccgcgaggtcaccggcaaggccgccgaggaagcgctgggcaaggcg
cacatcacggtcaacaagaacgccgtgccgaacgacccgcgcaagccgttcgtcacctcc
ggcctgcgcgtcggcaccccggccgtcaccacccgcggctaccgggaagcggacgtgacc
gaactggcgaactggatctgcgacgtgctggacgcgccagccgacgaggcggtgatcgcc
cgcgtgcgcgggaacgtcacggcgcagtgccagaagttcccggtctacggctga
DBGET
integrated database retrieval system
