Rhodanobacter denitrificans: R2APBS1_1002
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Entry
R2APBS1_1002 CDS
T02495
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R2APBS1_1002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhd03021
]
R2APBS1_1002
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_1002
Enzymes [BR:
rhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R2APBS1_1002
Transcription machinery [BR:
rhd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R2APBS1_1002
DNA repair and recombination proteins [BR:
rhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R2APBS1_1002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AGG88158
UniProt:
I4WKT7
LinkDB
All DBs
Position
1100765..1101763
Genome browser
AA seq
332 aa
AA seq
DB search
MAVSSTSVLRPRGLSVEQLGANRAKVVVEPLERGFGHTLGNALRRVLLSSIPGSAIVEVE
IDGVLHEYTTLEGLQEDVIEVLLNLKDVAIRQHSGDEVTLTLSKKGKGVVTAGDIVVDHS
VEIINPEHVICHLTKDIALNMRLKVRRGVGYQPASARQHPDDEARPIGRLQLDASFAPVL
RVAYEVDAARVEQRTNLDKLVLDIETNGTIGAEDAVRKAAEIINDQLSVFGDFSRRESAT
DKAEKSGFDPLLLRPIDDLELTVRSANCLKAESIYYIGDLVQKTEVELLKTPNLGKKSLT
EIKDVLGGRGLALGMKLENWPPPGLSHGMQLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagtttcgtcaactagcgtgctgcggccgcgtggcctcagcgtcgaacagctcgga
gccaaccgcgccaaggtggtggtcgagccgctcgagcgtggctttggccacaccctgggc
aacgcgctgcgtcgcgtgctgctctcctcgatccccggcagcgccatcgtcgaggtcgaa
atcgatggcgtgctgcacgagtacaccaccctggaaggcctgcaggaggacgtgatcgaa
gtcctgctgaacctcaaggatgtggcgatccgtcagcacagcggcgacgaggtcaccctc
accctgtccaagaagggcaagggcgtggtcacggccggcgacatcgtcgtcgaccactcg
gtggagatcatcaaccccgagcacgtgatctgccacctgaccaaggacatcgcgctcaac
atgcgcctgaaggtgcgtcgaggcgtcggctaccagccggccagcgcgcggcagcatccg
gatgacgaggcgcgtccgatcggccgcctgcaactggacgcgtcgttcgcgccggtgctg
cgcgtggcctacgaagtggacgcggctcgtgtcgagcagcgtaccaacctcgacaagctg
gtgctggacatcgagaccaacggcaccatcggcgccgaggatgcggtgcgcaaggcggcc
gagatcatcaacgaccagctgtcggtgttcggcgatttctcgcgtcgcgagagcgccacc
gacaaggcggagaagagcggtttcgatccgctgctgctgcgcccgatcgacgatctggag
ctcaccgtgcgttcggcgaactgcctgaaggccgagagcatctattacatcggcgacctg
gtgcagaagaccgaggtcgagctgctgaagacgccgaacctgggcaagaagtcgctgacc
gagatcaaggacgtgctgggcggtcgtggcctcgcgctgggcatgaagctcgagaactgg
ccgccgccgggcttgtcgcacggtatgcagctgggttga
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