Rhodanobacter denitrificans: R2APBS1_1012
Help
Entry
R2APBS1_1012 CDS
T02495
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhd03019
]
R2APBS1_1012
03009 Ribosome biogenesis [BR:
rhd03009
]
R2APBS1_1012
Messenger RNA biogenesis [BR:
rhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R2APBS1_1012
Ribosome biogenesis [BR:
rhd03009
]
Prokaryotic type
rRNA processing factors
R2APBS1_1012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Anti-TRAP
CHP02642
Motif
Other DBs
NCBI-ProteinID:
AGG88168
UniProt:
I4WKU7
LinkDB
All DBs
Position
1110527..1111999
Genome browser
AA seq
490 aa
AA seq
DB search
MSEEILINVTPRETRVGVVENGMLQEVHVERASRRGYVGNIYKGRVQRVMPGMQAVFVEI
GLERAAFLHASDIVRPAPAEGAESNGNGHLPSISELVHEGQEIVVQVVKDPISTKGARLS
AHLSIPSRYLVLLPYARTLGISARIEDEAERQRLREVLTPLLGDTPLGYIVRTNAEGQSA
ESLAFDVTYLGKVWRVVQENIARAKVGERVYEELSLPLRSLRDMLNEDIEKVRVDSRATF
ENVVKFVHKFMPNLDDRVEHYDGERPIFDLYGVEDEMQRALKKEVPLKSGGYLIVDQTEA
MTTIDVNTGAYLGTRNLEETVYRTNLEAAQAAARQLRLRNLGGIIIIDFIDMSDEEHKRQ
VLRMLGKGLARDHAKTTVYPMSALGLVEMTRKRTTESLARQLCEPCPACNGRGVLKTAET
VTYEIFREITRAVRQFNARKLLVMASPAVVNRILEEESGAVAELEEFISKSIRFQAEEHY
SQEQFDVVLL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagaaatcctgatcaacgtgaccccgcgcgagacgcgggtcggggtggtcgag
aacggcatgctgcaggaggtacacgtcgagcgggcgtcgcggcgcggctatgtcggcaac
atctacaagggtcgcgtgcagcgggtgatgccgggtatgcaggcggtgttcgtggagatc
gggctggagcgcgcggcgttcctgcacgcctcggacatcgtgcgcccggcaccggccgag
ggcgccgagtcgaacggcaacggccacctgccctcgatcagcgaactggtgcacgaaggc
caggagatcgtggtgcaggtggtcaaggacccgatcagcaccaagggcgcgcggctgtcg
gcgcacctgtcgatcccttcgcgctacctggtgctgctgccgtacgcgcgcacgctgggc
atttccgcgcggatcgaggacgaggccgagcgccagcgcctgcgcgaggtactgaccccg
ctgctcggcgacactccgctgggttacatcgtgcgcaccaatgccgaggggcagagcgcc
gagtcgctggcgttcgacgtgacctatctcggcaaggtgtggcgggtggtgcaggagaac
atcgccagggcgaaggtcggcgagcgcgtgtacgaggaattgtcgctgccgctgcgcagc
ctgcgcgacatgctcaacgaggacatcgagaaggtgcgggtggattcgcgcgcgacgttc
gagaacgtggtcaagttcgtgcacaagttcatgccgaacctggacgaccgcgtcgagcac
tacgacggcgaacggccgatcttcgacctgtacggcgtcgaggacgagatgcagcgcgcg
ctgaagaaggaagtgccgctgaaatccggcggctacctgatcgtcgaccagaccgaggcg
atgaccaccatcgacgtcaacaccggcgcctacctgggcacgcgcaacctggaggaaacc
gtctaccgcaccaacctggaggcggcgcaggcggcggcgcgccagctgcgcctgcgcaac
ctgggcggcatcatcatcatcgacttcatcgacatgagcgacgaggagcacaagcggcag
gtgctgcgcatgctcggcaaggggctggcgcgcgaccacgccaagaccacggtgtatccg
atgtcggcgctgggcctggtcgagatgacccgcaagcgcaccaccgaaagcctggcccgc
cagctgtgcgagccgtgcccggcctgcaacggccgcggcgtgctgaagaccgccgaaacg
gtgacctacgagatcttccgcgagatcacccgcgcggtgcgccagttcaacgcgcggaag
ctgctggtgatggccagcccggcggtggtcaaccggatcctggaagaggaatccggcgcg
gtggccgaactggaagagttcatctccaaaagcatacgcttccaggccgaagagcattat
tcgcaggaacagtttgatgtcgtgttgctgtaa
DBGET
integrated database retrieval system
