Rhodanobacter denitrificans: R2APBS1_1276
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Entry
R2APBS1_1276 CDS
T02495
Name
(GenBank) pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit
KO
K11381
2-oxoisovalerate dehydrogenase E1 component [EC:
1.2.4.4
]
Organism
rhd
Rhodanobacter denitrificans
Pathway
rhd00280
Valine, leucine and isoleucine degradation
rhd00640
Propanoate metabolism
rhd00785
Lipoic acid metabolism
rhd01100
Metabolic pathways
rhd01110
Biosynthesis of secondary metabolites
rhd01210
2-Oxocarboxylic acid metabolism
Module
rhd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
R2APBS1_1276
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
R2APBS1_1276
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
R2APBS1_1276
Enzymes [BR:
rhd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.4 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
R2APBS1_1276
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GFIT
Motif
Pfam:
E1_dh
Transketolase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
AGG88428
UniProt:
M4NFN3
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All DBs
Position
1403368..1405638
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AA seq
756 aa
AA seq
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MPIPFNLSARHKGFNRAEVVDQNFIEFVQLWQGEARAAPHDGEAVLPGSALDARGFRELL
ESQLISRHLDLMARVLRVQNKVFYTIGSSGHEGNAMVARLTRHTDPAFLHYRSGGFMAER
FRKIPGMDPVMDSALSFAASKDDPASGGRHKVWGSKPLWVLPQTSTIASHLPKALGTAVA
IEQARRIGHQLPIPDDSIAICSFGDASSNHATAQTSFNAAAWTAYQKLPAPVLFVCEDNG
IGISVKTPTGWVAANYQHRANLDYFFADGLDLAEGYAQVQRAVEHCRTTRRPTFLHLKTT
RVMGHAGTDFEIEWRSIEELFAVECSDPLLRSADIALASGLYSKDALLDLYEATRKRCFA
AAEDADSRHRLTSLEDVMAPLAPYTPAAVKAEATRADYAEKRLAVFGGEAKLPEKLPPRH
LAIQIGQALHDLLAKYPEALLFGEDVAQKGGVYTVTKGLNKTFKGSRVFNTLLDETMILG
LAQGYANMGMLPIPEIQYLAYFHNACDQIRGEAASLQFFSNGQYRNPMVMRVASLGYQKG
FGGHFHNDNSITALRDIPGLVVGCPSRGDDAALMLRTLMALAKVDGRVCAFLEPIALYMT
KDLYEAGDGQWQFDYPAPDQAMTLGEGRLYHEAANDLVVFTFGNGVPMALRAARTIEKEL
GWQVRVVDLRWLAPLNDAFIAAQAKTARRIIVLDEGRKSAGVGEGVITAIVEGGCGATPM
KRVVGADTFTPLAGAALLVLPGEADVVAAARGLAAG
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgcccattccgttcaacctcagcgcccgccacaagggcttcaaccgcgccgaagtcgtc
gaccagaacttcatcgagttcgtgcagctgtggcagggcgaggcgcgcgccgcgccgcac
gacggcgaggcagtgctgccgggcagcgcgctggacgcacgcggctttcgcgagctgctg
gaatcccaattgatctcgcgccacctcgacctgatggcgcgcgtgctgcgcgtgcagaac
aaggtgttctacacgatcggttcgtccggccacgaaggcaacgcgatggtggcgcggctg
acccggcacaccgatccggcgttcctgcattaccgctccggcggcttcatggccgagcgc
ttccgcaagatcccgggcatggacccggtgatggattcggcgctgtccttcgccgccagc
aaggacgatccggcctccggcggccgccacaaggtgtggggcagcaagccgctgtgggtg
ctgccgcagacctccaccatcgcctcgcacctgcccaaggcgctcggcaccgcggtggcg
atcgagcaggcgcgccgcatcggccaccagctgccgatccccgacgacagcatcgcgatc
tgctcgttcggcgacgcctccagcaaccacgccaccgcgcagacctcgttcaacgccgcg
gcatggacggcgtaccagaagctgccggcgccggtgctgttcgtgtgcgaggacaacggc
atcggtatctcggtgaagacgccgaccggctgggtcgcggccaactaccagcatcgcgcc
aacctcgattatttcttcgccgacggcctcgacctggccgagggctatgcccaggtgcag
cgtgcggtggagcattgccgcacgacccgccggccgaccttcctgcatctcaagaccacc
cgcgtgatgggccacgccggcaccgacttcgagatcgagtggcgcagcatcgaggagctc
tttgcggtcgaatgctccgacccgctgctgcgttcggccgacatcgcgctggcgtccggc
ctgtattcgaaggatgcactgctggatctgtacgaagccacccgcaagcgctgcttcgcc
gctgccgaggatgcggattcgcgccatcgactgacctcgctggaagacgtgatggccccg
ctggcgccgtacacgccggccgcggtgaaagccgaggccacgcgcgccgactatgcggag
aagcggctggccgtgttcggcggcgaggcgaagctgccggagaagctgccgccgcggcac
ctggcgatccagatcggccaggcgctgcacgatctcttggcgaagtacccggaggcgctg
ctgttcggcgaggacgtggcgcagaagggcggcgtgtacaccgtcaccaaggggctgaac
aagaccttcaagggcagccgcgtgttcaacacgctgctcgatgagaccatgatcctgggc
ctggcccagggctacgccaacatgggcatgctgccgatcccggagatccagtacctggcg
tacttccacaacgcctgcgaccagatccgcggcgaggcggcgtcgctgcagttcttctcc
aacggccagtaccgcaacccgatggtgatgcgggtggcctcgctgggctaccagaagggt
ttcggcggccacttccacaacgacaactcgatcaccgcgctgcgcgacattcccggcctg
gtggtgggctgccccagccgcggcgacgacgcggcattgatgctgcgcacgctgatggcg
ctggcgaaagtggacggccgcgtgtgcgccttcctcgagccgatcgcgctgtacatgacc
aaggacctgtacgaagccggcgacggccagtggcagttcgactatccggcaccggaccag
gcgatgacgctgggcgagggccgcctctaccacgaggcggcgaacgacctggtggtgttc
accttcggcaacggcgtgccgatggcgttgcgtgctgcgcgcacgatcgaaaaggaactg
ggctggcaggtgcgcgtggtcgacctgcgctggctggcgccgctcaacgacgccttcatc
gcggcacaggcgaagacggccaggcgcatcatcgtgctggacgaggggcgcaagagcgcc
ggcgtgggcgagggcgtgatcaccgcgatcgtcgagggcggctgcggcgccacaccgatg
aagcgcgtggtcggcgccgacaccttcaccccgctggccggtgcggcgctactggtgctg
ccgggcgaggccgacgtggtggcggcggcacgcgggctggcggcaggctga
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