Rhodanobacter denitrificans: R2APBS1_1336
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Entry
R2APBS1_1336 CDS
T02495
Name
(GenBank) soluble lytic murein transglycosylase-like protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhd01011
]
R2APBS1_1336
Enzymes [BR:
rhd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
R2APBS1_1336
Peptidoglycan biosynthesis and degradation proteins [BR:
rhd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
R2APBS1_1336
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Transglycosylas
Motif
Other DBs
NCBI-ProteinID:
AGG88487
UniProt:
M4NEV6
LinkDB
All DBs
Position
1464005..1465483
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AA seq
492 aa
AA seq
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MPSCSVVRTLRLAPLAVAISLLAACASTGGARPATPLDTLYGELDQASKGYETALQQSRE
GDLQASRLSLTHSLDRLKEASARCGNTAGCDPQRFFSAFDHLLRLKDGDFGSGQDLDSDV
DPAQAALATGSTGAASLPQAQRSVTLLHGQKLSQLIAMNGPVKAALEMWLTQWRPQLMDA
WVNYQYLRYQMWPQYQKADLPEALLFGIMAKESGGKVHAVSRSGASGPLQFMYATGMRFG
LGSDSGFDLRFDPAASARANAEYINEQLRVFNDNLELALGAYNGGEGRMRRTVGDDTAVS
FYDPRIYDQLSQETRDYVPAVLAAAWLFQHPDSYNLRFPKVDGAPGTVTLQRPASLSELT
VCLGSAGGMRDGWFRTLRNLNPRLDPQVTQPVGTPLQLPKLLERAYATRCVDGPWPILAG
DLHRAVVPVVAAPVAPVPVPRGTRRYTVRRGDTLISIVRKLHCSSVQEVAESNGLKHHRI
SIGQTLKLPVCR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtgttccgttgtgcgtaccctgcgtctggctccgctggccgtcgcgatcagt
ctgctggccgcctgtgccagcaccggcggcgccaggccggccaccccgctcgacacgctg
tacggcgaactcgaccaggccagcaagggctacgagaccgccctgcagcaatcgcgcgaa
ggcgacctgcaggcctcgcggctgagcctgacccactcgctggatcgcctgaaggaggcg
tcggcacgttgcggcaatactgccggctgcgatccgcagcggttcttctccgcgttcgac
cacctgctgcgcctgaaggacggcgatttcggcagcggccaggatctggacagcgacgtc
gatccagcgcaggctgcgctggccaccggcagcaccggtgccgccagcctgccgcaggcg
cagcgcagcgtgaccctgctgcacgggcagaagctgtcgcagctgatcgcgatgaacggg
ccggtgaaggcggcgctggagatgtggctgacccagtggcgcccgcagttgatggatgcc
tgggtcaactaccagtacctgcgttaccagatgtggccgcagtaccagaaggcggacctg
cccgaggcgctgctgttcggcatcatggccaaggaatccggcggcaaggtgcacgccgtg
tcgcgctcgggcgcgtcggggccgctgcagttcatgtacgccaccggcatgcgcttcggc
ctgggcagcgacagcggcttcgacttgcgcttcgatccggccgcctcggcgcgggcgaac
gcggagtacatcaacgagcagttgcgcgtcttcaacgacaacctcgaactcgcgctcggc
gcctacaacggcggcgaagggcgcatgcgccgcacggtcggcgacgataccgcggtgagc
ttctacgacccgcgcatctacgaccagctgtcgcaggaaacccgcgactacgtgccggcg
gtgctcgccgcggcgtggctgttccagcatccggacagctacaacctgcgcttcccgaag
gtcgacggtgcgcccggtacggtcaccctgcagcggccggcctcgttgtcggagctgact
gtctgcctgggctcggccggcggaatgagggatggctggttccgcaccctgcgcaacctc
aacccacggctggacccgcaggtgacccagccggtcggcacgccgctgcagttgccgaag
ctgctggagcgcgcctacgccacgcgctgcgtcgatggcccatggccgatcctcgccggc
gacctgcaccgcgcggtggtgccggtggtggcggccccggtggcgccggtgccggtgccg
aggggcacccgccgctacaccgttcgccggggcgacacgctgatcagcatcgtgcgcaag
ctgcattgctccagcgtgcaggaagtcgccgaatcgaacgggctgaagcatcaccgcatc
agcatcgggcagaccttgaagctgccggtctgccgctga
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