Rhodanobacter denitrificans: R2APBS1_1484
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Entry
R2APBS1_1484 CDS
T02495
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhd03032
]
R2APBS1_1484
03400 DNA repair and recombination proteins [BR:
rhd03400
]
R2APBS1_1484
Enzymes [BR:
rhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
R2APBS1_1484
DNA replication proteins [BR:
rhd03032
]
Prokaryotic type
DNA Topoisomerases
R2APBS1_1484
DNA repair and recombination proteins [BR:
rhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R2APBS1_1484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AGG88629
UniProt:
M4ND63
LinkDB
All DBs
Position
1617442..1620015
Genome browser
AA seq
857 aa
AA seq
DB search
MAELAKEVIRVNIEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNVWN
KPYKKSARVVGDVIGKYHPHGDQSVYDAIVRMAQPFSLRYLLVDGQGNFGSVDGDSAAAM
RYTEVRMSRLTHELLADIDKETVDFGPNYDESEHEPLVLPTRVPNLLVNGSAGIAVGMAT
NIPPHNLNEVIAATIALIDEPTLSIDELMHYIPGPDFPTHGIINGSSGIIEAYRTGRGRI
LVRAKAEIETESNGRETIIVHELPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDGM
RVVIEIRKDAMGDVVLNNLFQQTQLQVTFGINMVALLDGQPKLLNLKDILEAFIRHRREV
VTRRTIFELRKARARAHILEGLTVALANIDEMIELIKTSSSPAEARERMVARRWEAGLVR
ALLSATGADASRPEDMDPRDGLKDDGYQLSEAQALEILAMRLHRLTGLEQEKLSDEYRQI
LETIRGLIEILENPNRLLEVIREELEAVKAEFGDARRTEIQHSQEDLNVLDLIAPEDMVV
TLSHTGYVKRQPASTYRAQRRGGKGRSASALKDEDVVEQLWVVNTHDTLLTFTSTGRVYW
LKVYQIPEAGPGARGKPIINLLPLGEGEKVQAVLPVREYSDDRYVFFATRHGTVKKTPLT
EFAYQLQKGKQAIKLDEGDALVNVELTDGNSDILLFASNGKVNRFDENTVRSMGRTATGV
RGMKLVGGAEVVSLIVAAEGDILTATARGYGKRTELAEFAKKGRGTQGVIGIQCSERNGA
LVAAVQVTEAHELMLISNQGTLVRTRVAEVSQLGRNTQGVTLIRLPADETLVSVMRLDAE
EDNGEDAEVVEPSVANE
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctcgccaaagaagtgattcgcgtcaacatcgaagacgagatgcgccagagc
tacctcgattacgccatgagcgtgatcgtgggccgcgcactcccggatgtgcgtgacggc
ctgaaacccgtgcatcgccgcgtactgttcgcgatgaacgaactcggcaacgtatggaac
aagccgtacaagaagtcggcccgcgtggtcggtgacgtcatcggtaagtaccatccgcat
ggcgaccagtcggtatacgatgcgatcgtgcgcatggcgcagccgttctcgctgcgctac
ctgctggtcgacggccagggcaacttcggttcggtcgacggcgacagcgccgcggcgatg
cgctacaccgaagtgcgcatgtcgcggctcacccacgagctgctggccgacatcgacaag
gaaaccgtcgacttcggcccgaactacgacgaaagcgagcacgaaccgctggtgcttccc
acgcgcgtgccgaacctgctggtgaacggttcggccggcatcgcggtcggcatggccacc
aacatcccgccgcacaacctcaacgaggtgatcgcggcgacgatcgcgttgatcgacgag
cccacgctctcgatcgacgagttgatgcactacatcccgggcccggacttcccgacccac
ggcatcatcaacggttcttccggcatcatcgaggcgtaccgcaccggtcgcggccgcatc
ctggtgcgcgcgaaggccgagatcgagaccgagtcgaatggccgcgagacgatcatcgtc
cacgagctgccgtaccaggtgaacaaggcgcggctgatcgagaaaatcgccgagctggtc
aaggagaagaagctcgaaggcatcagcgaactgcgcgacgagtccgacaaggacggcatg
cgcgtcgtcatcgagatccgcaaggacgcgatgggcgacgtggtgctgaacaacctgttc
cagcagacccagctgcaggtaacgttcggcatcaacatggtggccctgctggacggccag
ccgaagctgctcaacctcaaggacatcctcgaggcgttcatccgccatcggcgcgaggtg
gtcacccgccgcaccatcttcgaactgcgcaaggcgcgagcccgtgcgcacatcctggaa
ggcctcaccgtcgcgctggcgaacatcgacgagatgatcgagttgatcaagacctcgtcg
tcgccggcggaggcacgtgagcgcatggtggcgcggcgctgggaagcgggcctggtgcgg
gccctgctgtccgccaccggcgccgacgcatcgcgcccggaagacatggatccgcgcgac
gggttgaaagacgacggctatcagctgtccgaggcgcaggcgctggaaatcctggcgatg
cggctgcaccgcctcaccgggctggaacaggaaaagctctccgacgagtaccggcagatc
ctggagaccatccgcggcctgatcgagatcctggagaacccgaaccgcctgctcgaagtg
atccgcgaggaactggaggcggtcaaggcggagttcggcgatgcgcggcgcaccgagatc
cagcattcgcaggaagacctcaacgtcctcgacctgattgcgccggaggacatggtggtc
acgctgtcgcacaccggctacgtcaagcgccagccggccagcacgtatcgcgcccagagg
cgcggcggcaagggtcgctcggcctcggcgctgaaggacgaggacgtggtcgagcagctg
tgggtggtcaacacgcacgacacgctgctcaccttcaccagcaccggccgcgtctactgg
ctcaaggtctaccagatcccggaggcaggcccgggcgcgcgcggcaagccgatcatcaac
ctgctgccgctgggcgagggcgaaaaggtgcaggcagtgctgccggtgcgcgaatatagc
gacgaccgttacgtgttcttcgctacccgtcacggcacggtcaagaagacgccgctgacc
gagttcgcctatcagctgcagaagggcaagcaggcgatcaagctcgacgagggagacgcg
ctggtcaacgtggagctcaccgacggcaacagcgacatcctgctgttcgcctccaacggc
aaggtcaaccgcttcgacgagaacaccgtgcgctcgatggggcgcacggccaccggcgtg
cgcggcatgaagctggttggcggcgccgaggtggtgtcgctgatcgtcgcggcggaaggc
gacatcctcacggctactgcacgcggttacggcaagcgtaccgagctggccgagttcgcc
aagaaggggcgtggcacccagggcgtgatcggcatccagtgctccgagcgcaacggcgcg
ctggttgccgcggtgcaggtcaccgaggcgcacgagctgatgctgatctccaaccagggc
accctggtgcgtacccgcgtggcggaggtctcgcagctcggccgcaatacccagggcgtc
accctgatccggctgcctgcggacgaaacgctggtcagcgtgatgcggctggatgcggaa
gaggacaacggcgaggatgccgaggtcgtcgagccttcggtcgccaacgagtga
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