Rhodanobacter denitrificans: R2APBS1_1522
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Entry
R2APBS1_1522 CDS
T02495
Name
(GenBank) pseudouridine synthase family protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rhd
Rhodanobacter denitrificans
Brite
KEGG Orthology (KO) [BR:
rhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhd03009
]
R2APBS1_1522
Enzymes [BR:
rhd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
R2APBS1_1522
Ribosome biogenesis [BR:
rhd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
R2APBS1_1522
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Phage_attach
Motif
Other DBs
NCBI-ProteinID:
AGG88665
UniProt:
M4ND56
LinkDB
All DBs
Position
complement(1657115..1658632)
Genome browser
AA seq
505 aa
AA seq
DB search
MNAPQKSVLSLKREPRADSDAPALEERLHKVLANAGLGSRRMLEQRIQSGEVELNGAPAE
IGMSVKAGDRVIMDGKQFVVATDSRDDTEVLIYHKPEGVLTTRDDPDGRPTVFEQLPRLK
GARWVAVGRLDINTTGLLLLTTDGALANALMHPRSGLEREYLCRVHGEVPDEVIEKLKAG
VELEDGPARFDEIAVISRGGSHSWFRVVIREGRNREVRRLWDSQGFLVSRLKRIRYGAIE
LPRNLRRGECEALDAEAVKQLRQTTGVDMPQPVLTLSPVLHQRRANRNVTEYRPASGAGT
AWTGGQDEARELRAYDRIREEPVRGRKPPRRDGKEVNGNLARPERGAPGGKRGGKSKRVA
PGQELPSVRTWFAGESRDGSGRPGAPRGNAGGAAGNRRAAGGKPFGAHSGGNEGRAAGSP
YGGFGGESRGPGPGLGGNRAPGNRGPRPQGQGQGNRAHGNPARPQGQGGNRPQGHGGNRP
QGGSRHGGPGGGRPPGRGGNRSGNR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgccgcaaaaatccgttttgtccctgaagcgcgaaccgcgcgccgacagcgac
gcccccgccctggaagaacgcctgcacaaggtgctggccaacgctggcctcggctcgcgc
cgcatgctcgagcagcgcatccagtccggcgaagtcgaactgaatggcgcccccgccgaa
atcggcatgagcgtgaaggccggcgaccgcgtgatcatggacggcaagcagttcgtcgta
gccaccgacagccgcgacgacaccgaggtgctgatctaccacaagcccgaaggcgtgctg
accacccgtgacgacccggacggccgccccaccgtgttcgaacagctgccgcgcctgaag
ggcgcgcgctgggtcgccgtgggccgactcgacatcaacaccaccggcctgctgctgctg
actaccgacggcgccctggccaatgcgctgatgcaccccaggagcggactcgaacgcgaa
tacctgtgccgtgtgcacggcgaggtgccggacgaagtcatcgagaaactcaaggctggc
gtggaactggaggacggtcccgcccgcttcgacgagatcgccgtgatcagtcgcggcggc
agccacagctggttccgcgtggtgatccgcgaaggccgcaaccgcgaggtgcgccgactg
tgggactcgcagggtttcctggtcagccggctcaagcgcatccgctacggcgcgatcgag
ctgccgcgcaacctgcgccgcggcgaatgcgaggcgctcgatgccgaagccgtcaagcag
ttgcgccagaccaccggcgtggacatgccgcagccggtactgaccctgagcccggtgctg
catcagcgccgcgccaaccgcaacgtcaccgagtatcgccccgcgagcggcgccggcacc
gcctggacgggcggccaggatgaggcgcgcgagctgcgcgcgtatgaccgcatccgcgaa
gagccggtgcgcggccgcaaaccgccgcgtcgcgacggcaaggaagtcaacggcaacctg
gcccgccccgaacgcggtgcgccgggcggcaaacgcggcggcaagagcaagcgggtggcg
ccgggccaggagctgccgtcggtgcgcacctggttcgccggcgagagccgcgatggcagc
ggtcgccctggcgcgccgcgcggcaacgccggtggtgcggccggcaaccgccgcgcagcc
ggcggcaagccgttcggcgcgcacagcggcggcaacgaaggtcgcgctgcgggcagcccc
tacggcggcttcggcggcgaatcgcgtggccccggccccggcctcggcggcaaccgtgca
ccgggcaatcgtggtccacgtccgcaaggccagggccagggcaaccgcgcgcatggcaac
ccggcacgcccacaaggccagggcggcaatcgtccgcaaggtcatggcggcaatcgcccg
caaggcggttcccggcacggcggtccgggcggcggtcggccaccgggtcgcggcggcaac
cgttcgggcaatcgctga
DBGET
integrated database retrieval system
